RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 CASC2Q6XLA1 102 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 FOXI2Q6ZQN5 318 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 DIRC1Q969H9 104 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 CCDC115Q96NT0 180 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 NDUFAF1Q9Y375 327 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 HSPB11Q9Y547 144 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 PTPRDP23468 1912 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 RFX7Q2KHR2 1363 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 TANC2Q9HCD6 1990 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 DLC1Q96QB1 1528 aa0.79□□□□□ -2.28
CDC27-212ENST00000570818 FER1L6Q2WGJ9 1857 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 C3orf85A0A1B0GTC6 90 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 ARL5CA6NH57 179 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 H3BMG7 143 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 LSM3P62310 102 aaKnown RBP0.78□□□□□ -2.28
CDC27-212ENST00000570818 SPATA45Q537H7 98 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 CLEC2BQ92478 149 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 TAF9BQ9HBM6 251 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 NIT2Q9NQR4 276 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 BCL9O00512 1426 aa0.78□□□□□ -2.28
CDC27-212ENST00000570818 TCOF1Q13428 1488 aaKnown RBP0.78□□□□□ -2.28
CDC27-212ENST00000570818 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.77□□□□□ -2.29
CDC27-212ENST00000570818 TRBV27A0A0K0K1C4 114 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 LOC107984640A0A0U1RRK4 108 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 PRORSD1PA6NEY8 169 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 SAA1P0DJI8 122 aaPredicted RBP0.77□□□□□ -2.29
CDC27-212ENST00000570818 EFNA4P52798 201 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 NEDD8Q15843 81 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 LINC00299Q6ZSB3 139 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 TAC4Q86UU9 113 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 CCL4L1Q8NHW4 92 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 BRK1Q8WUW1 75 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 AP1S3Q96PC3 154 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 BOKQ9UMX3 212 aaPredicted RBP0.77□□□□□ -2.29
CDC27-212ENST00000570818 GINS2Q9Y248 185 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 A2MP01023 1474 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 PHRF1Q9P1Y6 1649 aaKnown RBP0.77□□□□□ -2.29
CDC27-212ENST00000570818 FANCMQ8IYD8 2048 aa0.77□□□□□ -2.29
CDC27-212ENST00000570818 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
CDC27-212ENST00000570818 LAMA4Q16363 1823 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 ERBINQ96RT1 1412 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 LOC107984156A0A0G2JMH3 177 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 TRBV7-6A0A0J9YX20 115 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 BBIP1A8MTZ0 92 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 J3KT08 172 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 M0QZK8 103 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 SULT1C4O75897 302 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 IGLV3-1P01715 115 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 CRYGSP22914 178 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 GLIPR1L1Q6UWM5 242 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 ZCCHC23Q6ZST2 131 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 AKAP14Q86UN6 197 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 ARL17AQ8IVW1 177 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 LINC00269Q8N2A0 174 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 TMEM229BQ8NBD8 167 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 MORN4Q8NDC4 146 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 CBLN4Q9NTU7 201 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 FKBP11Q9NYL4 201 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 ZGRF1Q86YA3 2104 aa0.76□□□□□ -2.29
CDC27-212ENST00000570818 USP54Q70EL1 1684 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 ANKRD30AQ9BXX3 1397 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 IGHV3-33P01772 117 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 RPS3P23396 243 aaKnown RBP eCLIP0.75□□□□□ -2.29
CDC27-212ENST00000570818 OR8I2Q8N0Y5 310 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 OR51A4Q8NGJ6 313 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 OR10AC1Q8NH08 325 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 CIB3Q96Q77 187 aaPredicted RBP0.75□□□□□ -2.29
CDC27-212ENST00000570818 MYH1P12882 1939 aa0.75□□□□□ -2.29
CDC27-212ENST00000570818 XIRP1Q702N8 1843 aaKnown RBP0.75□□□□□ -2.29
CDC27-212ENST00000570818 COL1A1P02452 1464 aaPredicted RBP0.74□□□□□ -2.29
CDC27-212ENST00000570818 FAM135BQ49AJ0 1406 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 ANK1P16157 1881 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 KIAA1549LQ6ZVL6 1849 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 DPM2O94777 84 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 CD14P08571 375 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 ETV6P41212 452 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 FOXA3P55318 350 aaPredicted RBP0.74□□□□□ -2.29
CDC27-212ENST00000570818 PSPHP78330 225 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 OCIAD2Q56VL3 154 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 LINC00575Q6W349 94 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 C3orf62Q6ZUJ4 267 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 C5orf17Q8NAS9 161 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 OR5A2Q8NGI9 324 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 PYDC1Q8WXC3 89 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 NABP2Q9BQ15 211 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 AIF1LQ9BQI0 150 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 LIMD2Q9BT23 127 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 SPANXA1Q9NS26 97 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 CALML5Q9NZT1 146 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
CDC27-212ENST00000570818 ASCC3Q8N3C0 2202 aaKnown RBP0.74□□□□□ -2.29
CDC27-212ENST00000570818 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.74□□□□□ -2.29
CDC27-212ENST00000570818 OVOS2A0A0G2JMS6 1433 aa0.73□□□□□ -2.29
CDC27-212ENST00000570818 MED12Q93074 2177 aa0.73□□□□□ -2.29
CDC27-212ENST00000570818 TET1Q8NFU7 2136 aa0.73□□□□□ -2.29
CDC27-212ENST00000570818 CITO14578 2027 aa0.73□□□□□ -2.29
CDC27-212ENST00000570818 A0A1W2PPM0 123 aa0.73□□□□□ -2.29
CDC27-212ENST00000570818 EDF1O60869 148 aaKnown RBP0.73□□□□□ -2.29
CDC27-212ENST00000570818 HBDP02042 147 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms