RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 GOLT1AQ6ZVE7 132 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 MRAPQ8TCY5 172 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 AGPAT4-IT1Q9H0P7 198 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 KLF12Q9Y4X4 402 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 RBMY1BA6NDE4 496 aaKnown RBP17.26■□□□□ 0.35
RAB40C-212ENST00000569575 RBMY1EA6NEQ0 496 aaKnown RBP17.26■□□□□ 0.35
RAB40C-212ENST00000569575 RBMY1DP0C7P1 496 aaKnown RBP17.26■□□□□ 0.35
RAB40C-212ENST00000569575 ATP5G3P48201 142 aa17.26■□□□□ 0.35
RAB40C-212ENST00000569575 DEFA6Q01524 100 aa17.26■□□□□ 0.35
RAB40C-212ENST00000569575 HAGHQ16775 308 aa17.26■□□□□ 0.35
RAB40C-212ENST00000569575 C11orf52Q96A22 123 aa17.26■□□□□ 0.35
RAB40C-212ENST00000569575 ZNF492Q9P255 531 aa17.26■□□□□ 0.35
RAB40C-212ENST00000569575 AGRNO00468 2067 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 TRBV6-1A0A0K0K1D8 114 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 TMEM250H0YL14 139 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 PRB2P02812 416 aaPredicted RBP17.25■□□□□ 0.35
RAB40C-212ENST00000569575 FRMD6-AS1P0C7T7 363 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 LEPP41159 167 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 AMTNQ6UX39 209 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 FMC1Q96HJ9 113 aa17.25■□□□□ 0.35
RAB40C-212ENST00000569575 EIF5A2Q9GZV4 153 aaKnown RBP17.25■□□□□ 0.35
RAB40C-212ENST00000569575 IGKV2-40A0A087WW87 121 aaPredicted RBP17.24■□□□□ 0.35
RAB40C-212ENST00000569575 IGKV2D-40P01614 121 aaPredicted RBP17.24■□□□□ 0.35
RAB40C-212ENST00000569575 SAPCD1Q5SSQ6 148 aa17.24■□□□□ 0.35
RAB40C-212ENST00000569575 NDFIP1Q9BT67 221 aa17.24■□□□□ 0.35
RAB40C-212ENST00000569575 CRISP2P16562 243 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 CDKN1BP46527 198 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 DEFB1P60022 68 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 GNG5P63218 68 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 FLI1Q01543 452 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-212ENST00000569575 Q6ZWC4 215 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 FAM19A4Q96LR4 140 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 VGLL1Q99990 258 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 C20orf144Q9BQM9 153 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 MED9Q9NWA0 146 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 RPH3ALQ9UNE2 315 aa17.23■□□□□ 0.35
RAB40C-212ENST00000569575 ZNF705DP0CH99 300 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-212ENST00000569575 ZNF705BP0CI00 300 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-212ENST00000569575 CT45A10P0DMU9 189 aa17.22■□□□□ 0.35
RAB40C-212ENST00000569575 RPL35AP18077 110 aaKnown RBP17.22■□□□□ 0.35
RAB40C-212ENST00000569575 AKR1C3P42330 323 aa17.22■□□□□ 0.35
RAB40C-212ENST00000569575 PEA15Q15121 130 aa17.22■□□□□ 0.35
RAB40C-212ENST00000569575 TMEM183BQ1AE95 376 aa17.22■□□□□ 0.35
RAB40C-212ENST00000569575 C2CD4CQ8TF44 421 aa17.22■□□□□ 0.35
RAB40C-212ENST00000569575 ZFP30Q9Y2G7 519 aa17.22■□□□□ 0.35
RAB40C-212ENST00000569575 RAB19A4D1S5 217 aa17.21■□□□□ 0.35
RAB40C-212ENST00000569575 TAS2R60P59551 318 aa17.21■□□□□ 0.35
RAB40C-212ENST00000569575 UBE2G1P62253 170 aa17.21■□□□□ 0.35
RAB40C-212ENST00000569575 PSG8Q9UQ74 426 aa17.21■□□□□ 0.35
RAB40C-212ENST00000569575 IGLV2-11P01706 119 aa17.2■□□□□ 0.34
RAB40C-212ENST00000569575 ERCC8Q13216 396 aa17.2■□□□□ 0.34
RAB40C-212ENST00000569575 TOR2AQ5JU69 321 aa17.2■□□□□ 0.34
RAB40C-212ENST00000569575 RARRES2Q99969 163 aa17.2■□□□□ 0.34
RAB40C-212ENST00000569575 TP53TG1Q9Y2A0 90 aa17.2■□□□□ 0.34
RAB40C-212ENST00000569575 IGKV3-20P01619 116 aa17.19■□□□□ 0.34
RAB40C-212ENST00000569575 PCNPQ8WW12 178 aaKnown RBP17.19■□□□□ 0.34
RAB40C-212ENST00000569575 SMIM12Q96EX1 92 aa17.19■□□□□ 0.34
RAB40C-212ENST00000569575 IGF2BP2-AS1Q96M15 143 aa17.19■□□□□ 0.34
RAB40C-212ENST00000569575 B9D2Q9BPU9 175 aa17.19■□□□□ 0.34
RAB40C-212ENST00000569575 SCO2A0A1W2PP80 73 aa17.18■□□□□ 0.34
RAB40C-212ENST00000569575 CA1P00915 261 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-212ENST00000569575 KLLNB2CW77 178 aa17.17■□□□□ 0.34
RAB40C-212ENST00000569575 COX8CQ7Z4L0 72 aa17.17■□□□□ 0.34
RAB40C-212ENST00000569575 TMEM256Q8N2U0 113 aa17.17■□□□□ 0.34
RAB40C-212ENST00000569575 SLC35B3Q9H1N7 401 aa17.17■□□□□ 0.34
RAB40C-212ENST00000569575 GPX1P07203 203 aa17.16■□□□□ 0.34
RAB40C-212ENST00000569575 NHLRC4P0CG21 123 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-212ENST00000569575 TREM1Q9NP99 234 aa17.16■□□□□ 0.34
RAB40C-212ENST00000569575 TRAV8-1A0A0A6YYK1 113 aa17.15■□□□□ 0.34
RAB40C-212ENST00000569575 INSP01308 110 aa17.15■□□□□ 0.34
RAB40C-212ENST00000569575 LTAP01374 205 aa17.15■□□□□ 0.34
RAB40C-212ENST00000569575 GIG44P09565 113 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-212ENST00000569575 SPINK13Q1W4C9 94 aa17.15■□□□□ 0.34
RAB40C-212ENST00000569575 PRNTQ86SH4 94 aa17.15■□□□□ 0.34
RAB40C-212ENST00000569575 RPL35P42766 123 aaKnown RBP17.14■□□□□ 0.33
RAB40C-212ENST00000569575 UQCC3Q6UW78 93 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 Q86TA4 180 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 ZFAND2AQ8N6M9 145 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 CSNK1G2-AS1Q8NCQ2 148 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 LINC00479Q96M42 142 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 XCL2Q9UBD3 114 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 GOLT1BQ9Y3E0 138 aa17.14■□□□□ 0.33
RAB40C-212ENST00000569575 M0R2Z0 102 aa17.13■□□□□ 0.33
RAB40C-212ENST00000569575 CRXO43186 299 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-212ENST00000569575 FAM74A3Q4VXF1 159 aa17.13■□□□□ 0.33
RAB40C-212ENST00000569575 TMEM183AQ8IXX5 376 aa17.13■□□□□ 0.33
RAB40C-212ENST00000569575 RNF183Q96D59 192 aa17.13■□□□□ 0.33
RAB40C-212ENST00000569575 RCHY1Q96PM5 261 aa17.13■□□□□ 0.33
RAB40C-212ENST00000569575 SPATA25Q9BR10 227 aa17.13■□□□□ 0.33
RAB40C-212ENST00000569575 DNAH3Q8TD57 4116 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 TRAV34A0A0B4J273 112 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 C7orf71A4D174 169 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 LINC00862A6NCI5 91 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 C9JCJ5 164 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 SRP19P09132 144 aaKnown RBP17.12■□□□□ 0.33
RAB40C-212ENST00000569575 SMUG1Q53HV7 270 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 BAGE2Q86Y30 109 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 SBSPONQ8IVN8 264 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 Q8TAT8 98 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 ASCL2Q99929 193 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms