RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 IGHV4-61A0A0C4DH41 118 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 A0A1B0GUT8 65 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 OR2T8A6NH00 312 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 A8MWP6 167 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 J3QLI3 93 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 CHEK1O14757 476 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 CA1P00915 261 aaPredicted RBP4.46□□□□□ -1.7
CDH13-213ENST00000569454 IGF1P05019 195 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 PMCHP20382 165 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 DDTP30046 118 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 GPR183P32249 361 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 AMTP48728 403 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 SRSF2Q01130 221 aaKnown RBP4.46□□□□□ -1.7
CDH13-213ENST00000569454 ATP5G2Q06055 141 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 SAMD13Q5VXD3 122 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 OR2D3Q8NGH3 330 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 C18orf32Q8TCD1 76 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 CHCHD1Q96BP2 118 aaKnown RBP4.46□□□□□ -1.7
CDH13-213ENST00000569454 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 HSPB9Q9BQS6 159 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 MED13LQ71F56 2210 aa4.46□□□□□ -1.7
CDH13-213ENST00000569454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.45□□□□□ -1.7
CDH13-213ENST00000569454 TRAV8-1A0A0A6YYK1 113 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 KIR2DL5BA0A0G2JN68 375 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 KIR2DL5BA0A0G2JPC4 375 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 SH2D7A6NKC9 451 aaPredicted RBP4.45□□□□□ -1.7
CDH13-213ENST00000569454 H3BTX0 84 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 BUB3O43684 328 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 SPINK4O60575 86 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 HSBP1O75506 76 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 IGHG2P01859 326 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 GPX1P07203 203 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 OR5AL1P0C617 328 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 LINC00310P59036 64 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 SLC35B1P78383 322 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 SLAQ13239 276 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 FBLN7Q53RD9 439 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 FAM120AOSQ5T036 256 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 C9orf139Q6ZV77 190 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 REC114Q7Z4M0 266 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 KIR2DL5AQ8N109 375 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 RNF152Q8N8N0 203 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 ZC2HC1AQ96GY0 325 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 CCDC140Q96MF4 163 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 ALKBH7Q9BT30 221 aaPredicted RBP4.45□□□□□ -1.7
CDH13-213ENST00000569454 LENEPQ9Y5L5 61 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 CSPG4Q6UVK1 2322 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 PLXNB1O43157 2135 aa4.45□□□□□ -1.7
CDH13-213ENST00000569454 APCP25054 2843 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 LOC102724200A0A096LPH7 203 aaPredicted RBP4.44□□□□□ -1.7
CDH13-213ENST00000569454 A0A1W2PS18 150 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 C20orf202A1L168 122 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 TMEM89A2RUT3 159 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 TMEM189A5PLL7 270 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 A6NDX4 124 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 ZNF785A8K8V0 405 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 ZNF705FA8MVS1 300 aaPredicted RBP4.44□□□□□ -1.7
CDH13-213ENST00000569454 NDUFA4O00483 81 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 CLEC3BP05452 202 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 SNRPCP09234 159 aaKnown RBP4.44□□□□□ -1.7
CDH13-213ENST00000569454 ZNF705DP0CH99 300 aaPredicted RBP4.44□□□□□ -1.7
CDH13-213ENST00000569454 ZNF705BP0CI00 300 aaPredicted RBP4.44□□□□□ -1.7
CDH13-213ENST00000569454 COX6B1P14854 86 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 CTRLP40313 264 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 CAMPP49913 170 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 PMCHL1Q16048 86 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 Q6ZWC4 215 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 TCF24Q7RTU0 167 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 GTSF1Q8WW33 167 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 PGLYRP4Q96LB8 373 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 PRR25Q96S07 402 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 ASCL2Q99929 193 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 C20orf144Q9BQM9 153 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 VAMP8Q9BV40 100 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
CDH13-213ENST00000569454 IGHV4-30-2A0A087WSY4 118 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 A0A1B0GUS0 222 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 M0R3E3 92 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 SH2D1AO60880 128 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 APOHP02749 345 aaPredicted RBP4.43□□□□□ -1.7
CDH13-213ENST00000569454 TRGV3P03979 118 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 KIAA1644Q3SXP7 199 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 C9orf152Q5JTZ5 239 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 CDPF1Q6NVV7 123 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 CLEC19AQ6UXS0 136 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
CDH13-213ENST00000569454 ZNF493Q6ZR52 646 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 TEX29Q8N6K0 151 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 KLHDC1Q8N7A1 406 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 LINC01356Q8N9X3 169 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 PIFOQ8TCI5 191 aa4.43□□□□□ -1.7
CDH13-213ENST00000569454 SGK494Q96LW2 274 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms