RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 CABIN1Q9Y6J0 2220 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 SRRM4A7MD48 611 aaKnown RBP5.66□□□□□ -1.5
CNOT1-216ENST00000569240 EFNA2O43921 213 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 PRSS22Q9GZN4 317 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 SPTBP11277 2137 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 IGKV3-15P01624 115 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 GGNQ86UU5 652 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 CD177Q8N6Q3 437 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 SAP25Q8TEE9 199 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 CRYGBP07316 175 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 EIF4EBP1Q13541 118 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-216ENST00000569240 C19orf71A6NCJ1 209 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 CRLF1O75462 422 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 DENND4AQ7Z401 1863 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 LINC00527Q9UJ94 153 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 H3BUA1 57 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 MBD6Q96DN6 1003 aa5.66□□□□□ -1.5
CNOT1-216ENST00000569240 COL5A3P25940 1745 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-216ENST00000569240 INSP01308 110 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 FAM120AOSQ5T036 256 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 LGALS9O00182 355 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 TRAV41A0A0B4J266 112 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
CNOT1-216ENST00000569240 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 LINC00526Q96FQ7 95 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 CHCHD5Q9BSY4 110 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 METRNQ9UJH8 293 aa5.65□□□□□ -1.5
CNOT1-216ENST00000569240 C15orf32Q32M92 178 aa5.65□□□□□ -1.51
CNOT1-216ENST00000569240 CFAP126Q5VTH2 177 aa5.65□□□□□ -1.51
CNOT1-216ENST00000569240 SLC25A29Q8N8R3 303 aa5.65□□□□□ -1.51
CNOT1-216ENST00000569240 THSD7AQ9UPZ6 1657 aa5.65□□□□□ -1.51
CNOT1-216ENST00000569240 C1orf195Q5TG92 126 aa5.65□□□□□ -1.51
CNOT1-216ENST00000569240 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 CDK2AP2O75956 126 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 EGR2P11161 476 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-216ENST00000569240 NBL1P41271 181 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 ZNF784Q8NCA9 323 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-216ENST00000569240 FREM3P0C091 2139 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 LPAL2Q16609 132 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 GAFA1Q96PS6 74 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 GP9P14770 177 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 SLC25A45Q8N413 288 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV3-64A0A075B6Q5 118 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 CELA3BP08861 270 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 HOXD3P31249 432 aaPredicted RBP5.64□□□□□ -1.51
CNOT1-216ENST00000569240 ZFP2Q6ZN57 461 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 C20orf204Q6ZNR8 217 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 C15orf65H3BRN8 121 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 BUB1B-PAK6H3BSN5 160 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 COX7A2LO14548 114 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 TIMM17BO60830 172 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV1-46P01743 117 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 TRGV4A0A0C4DH28 118 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 WFDC12Q8WWY7 111 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 DAZ1Q9NQZ3 744 aaKnown RBP5.64□□□□□ -1.51
CNOT1-216ENST00000569240 SELENOKQ9Y6D0 94 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 UTRNP46939 3433 aa5.64□□□□□ -1.51
CNOT1-216ENST00000569240 RPL18AQ02543 176 aaKnown RBP5.63□□□□□ -1.51
CNOT1-216ENST00000569240 SERP1Q9Y6X1 66 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV1OR15-1A0A075B7D0 117 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 NDUFA4O00483 81 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 RFPL3SP0C7P2 107 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
CNOT1-216ENST00000569240 FAM201AQ5SY85 155 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 IGKV1D-17A0A075B6S4 117 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 FXYD7P58549 80 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 Q8TAT8 98 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 SPINK2P20155 84 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 MUSTN1Q8IVN3 82 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 TMEM200BQ69YZ2 307 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 TMEM178BH3BS89 294 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 CELA2AP08217 269 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 CLUHP3Q96NS8 147 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
CNOT1-216ENST00000569240 PKIGQ9Y2B9 76 aa5.63□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV1-18A0A0C4DH31 117 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 KRTAP27-1Q3LI81 207 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 FAM222AQ5U5X8 452 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 MTCL1Q9Y4B5 1905 aaKnown RBP5.62□□□□□ -1.51
CNOT1-216ENST00000569240 TCL1BO95988 128 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 TRIP6Q15654 476 aaKnown RBP5.62□□□□□ -1.51
CNOT1-216ENST00000569240 C10orf55Q5SWW7 151 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 ZNF134P52741 427 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 FAM167A-AS1Q96KT0 104 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 STHQ8IWL8 128 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 C1orf159Q96HA4 380 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 ARRDC1-AS1Q9H2J1 176 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 KNL1Q8NG31 2342 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 NDUFB1O75438 58 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 DAD1P61803 113 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 FAM168AQ92567 244 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 U3KQK5 164 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 MCM3APO60318 1980 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 RPP25Q9BUL9 199 aaKnown RBP5.62□□□□□ -1.51
CNOT1-216ENST00000569240 SCN10AQ9Y5Y9 1956 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 CASP8AP2Q9UKL3 1982 aa5.62□□□□□ -1.51
CNOT1-216ENST00000569240 SHANK3Q9BYB0 1731 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms