RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 WRBO00258 174 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 HPGDSO60760 199 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 ASIPP42127 132 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 OPCMLQ14982 345 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 LINC00305Q7Z4B0 112 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 ATP6V0E2Q8NHE4 81 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 RMI2Q96E14 147 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 YIPF6Q96EC8 236 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 SPXQ9BT56 116 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 PAXXQ9BUH6 204 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 NPVFQ9HCQ7 196 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 PRELID1Q9Y255 219 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 LINC00854A0A1B0GVQ3 168 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 FNDC10F2Z333 226 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 GOSR2O14653 212 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 ZNF253O75346 499 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 SEC11BP0C7V7 166 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 AKAIN1P0CW23 69 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 PRB4P10163 310 aaPredicted RBP5.7□□□□□ -1.5
SMG1-216ENST00000569122 NEDD8Q15843 81 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 ZNF546Q86UE3 836 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 RASL10AQ92737 203 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 SAT2Q96F10 170 aaPredicted RBP5.7□□□□□ -1.5
SMG1-216ENST00000569122 ZNF479Q96JC4 524 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 SRRQ9GZT4 340 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
SMG1-216ENST00000569122 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 TRAV8-1A0A0A6YYK1 113 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 TRAV4A0A0B4J268 109 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 IGHV3-30P01768 117 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 IGHV3-33P01772 117 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 OR4E1P0C645 316 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 SFTA3P0C7M3 94 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 IGHV3-30-3P0DP02 117 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 IGHV3-30-5P0DP03 117 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 HIST1H1EP10412 219 aaKnown RBP5.69□□□□□ -1.5
SMG1-216ENST00000569122 CRISP2P16562 243 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 LSM3P62310 102 aaKnown RBP5.69□□□□□ -1.5
SMG1-216ENST00000569122 CD300CQ08708 224 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 BTN1A1Q13410 526 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 FFAR4Q5NUL3 377 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 TMEM78Q5T7P6 136 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 LELP1Q5T871 98 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 FAM122CQ6P4D5 195 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 PATE2Q6UY27 113 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 C9orf47Q6ZRZ4 202 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 C12orf45Q8N5I9 185 aaPredicted RBP5.69□□□□□ -1.5
SMG1-216ENST00000569122 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 OR10P1Q8NGE3 313 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 PRADC1Q9BSG0 188 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 VCX3AQ9NNX9 186 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 MGAT4CQ9UBM8 478 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 EXTL2Q9UBQ6 330 aa5.69□□□□□ -1.5
SMG1-216ENST00000569122 A0A0D9SG52 128 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 TRBV7-9A0A0J9YWB2 115 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 RNF222A6NCQ9 220 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 GGTLC3B5MD39 225 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 SLC17A3O00476 420 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 LECT2O14960 151 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 CIDEAO60543 219 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 IGLC2P0DOY2 106 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 TGFBR1P36897 503 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 WFDC2Q14508 124 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 C14orf177Q52M58 125 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 C10orf113Q5VZT2 155 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 CLVS1Q8IUQ0 354 aaPredicted RBP5.68□□□□□ -1.5
SMG1-216ENST00000569122 DAZAP1Q96EP5 407 aaKnown RBP5.68□□□□□ -1.5
SMG1-216ENST00000569122 FAM19A4Q96LR4 140 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 PRR13Q9NZ81 148 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 RABL2AQ9UBK7 228 aaPredicted RBP5.68□□□□□ -1.5
SMG1-216ENST00000569122 TP53TG3Q9ULZ0 132 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 RABL2BQ9UNT1 228 aa5.68□□□□□ -1.5
SMG1-216ENST00000569122 TRGV11A0A075B6L2 103 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 HOXB5P09067 269 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 SNRPCP09234 159 aaKnown RBP5.67□□□□□ -1.5
SMG1-216ENST00000569122 ERCC8Q13216 396 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 RAB31Q13636 194 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 LINC01620Q4KN68 170 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 FAAP20Q6NZ36 180 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 Q6ZRG5 221 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 BAALCQ8WXS3 180 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 AGPAT4-IT1Q9H0P7 198 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 GTSF1LQ9H1H1 148 aa5.67□□□□□ -1.5
SMG1-216ENST00000569122 H3BP45 60 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 H3BQ15 152 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 H3BTX0 84 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 PDE6HQ13956 83 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 VWC2Q2TAL6 325 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 TMEM128Q5BJH2 165 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 FAM159AQ6UWV7 190 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 OR1L4Q8NGR5 311 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 GGACTQ9BVM4 153 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 AAMDCQ9H7C9 122 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 SLC39A9Q9NUM3 307 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 PSENENQ9NZ42 101 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 TIMM9Q9Y5J7 89 aa5.66□□□□□ -1.5
SMG1-216ENST00000569122 TRBV19A0A075B6N1 114 aa5.65□□□□□ -1.5
SMG1-216ENST00000569122 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms