RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MARVELD1Q9BSK0 173 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 KCNIP2Q9NS61 270 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 ZNF586Q9NXT0 402 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 OR5AC2Q9NZP5 309 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 PRELID1Q9Y255 219 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 TIMM8BQ9Y5J9 83 aaPredicted RBP3.39□□□□□ -1.87
CLK3-219ENST00000567805 NPIPB6E9PJ23 425 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 H0YIZ8 118 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 SIX6O95475 246 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 DEFB130BP0DP73 79 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 DEFB130AP0DP74 79 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 PRB4P10163 310 aaPredicted RBP3.38□□□□□ -1.87
CLK3-219ENST00000567805 HIST1H1EP10412 219 aaKnown RBP3.38□□□□□ -1.87
CLK3-219ENST00000567805 HTN1P15515 57 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 LEPP41159 167 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 H2BFSP57053 126 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 CT83Q5H943 113 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 GFI1BQ5VTD9 330 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 LINC00336Q6ZUF6 198 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 UBE2DNLQ8IWF7 75 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 THAP6Q8TBB0 222 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 RNASE8Q8TDE3 154 aaKnown RBP3.38□□□□□ -1.87
CLK3-219ENST00000567805 PPP1R1CQ8WVI7 109 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 MRPL32Q9BYC8 188 aaKnown RBP3.38□□□□□ -1.87
CLK3-219ENST00000567805 KRTAP9-8Q9BYQ0 159 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 WDR61Q9GZS3 305 aaKnown RBP3.38□□□□□ -1.87
CLK3-219ENST00000567805 AAMDCQ9H7C9 122 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 BATF3Q9NR55 127 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 TIMM9Q9Y5J7 89 aa3.38□□□□□ -1.87
CLK3-219ENST00000567805 TRAV12-3A0A0B4J271 114 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 CBY3A6NI87 242 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 C17orf112F2Z3M2 114 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 F5H768 121 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 M0R3E3 92 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 SSNA1O43805 119 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 NDUFB4O95168 129 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 MPC2O95563 127 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 SLC25A5P05141 298 aaKnown RBP3.37□□□□□ -1.87
CLK3-219ENST00000567805 ATP5G1P05496 136 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 CT45A10P0DMU9 189 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 PYYP10082 97 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 ATP5G3P48201 142 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 FAM3BP58499 235 aaPredicted RBP3.37□□□□□ -1.87
CLK3-219ENST00000567805 CLINT1Q14677 625 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 KIR3DS1Q14943 382 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 FCN2Q15485 313 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 LGALS9BQ3B8N2 356 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 GCSAMLQ5JQS6 135 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 TOR2AQ5JU69 321 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 MIR17HGQ75NE6 70 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 CCDC28AQ8IWP9 274 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 BLNKQ8WV28 456 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 FAM167A-AS1Q96KT0 104 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 LINC00477Q96M19 166 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 ATP5SQ99766 215 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 PYGO2Q9BRQ0 406 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 PARD6GQ9BYG4 376 aaPredicted RBP3.37□□□□□ -1.87
CLK3-219ENST00000567805 NOP10Q9NPE3 64 aaKnown RBP3.37□□□□□ -1.87
CLK3-219ENST00000567805 HSPB11Q9Y547 144 aa3.37□□□□□ -1.87
CLK3-219ENST00000567805 C7orf71A4D174 169 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 SNURFLB1AK76 121 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 KLLNB2CW77 178 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 J3KRW8 73 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 M0R2N4 97 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 ZNF324O75467 553 aaPredicted RBP3.36□□□□□ -1.87
CLK3-219ENST00000567805 IFNA5P01569 189 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 NMBP08949 121 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 NBEAP1P0C6P0 100 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 CRISP2P16562 243 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 RPL12P30050 165 aaKnown RBP3.36□□□□□ -1.87
CLK3-219ENST00000567805 ERCC8Q13216 396 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 ICAM4Q14773 271 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 TMEM78Q5T7P6 136 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 FAM122CQ6P4D5 195 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 Q6ZR54 194 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 C9orf47Q6ZRZ4 202 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 LYPD1Q8N2G4 141 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 LINC00612Q8N6U2 182 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 ZNF680Q8NEM1 530 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 FXYD5Q96DB9 178 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 FAM19A4Q96LR4 140 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 LINC00467Q9BRT7 94 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 ATG101Q9BSB4 218 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 PAXXQ9BUH6 204 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 AGPAT4-IT1Q9H0P7 198 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 OR51M1Q9H341 326 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 MBD2Q9UBB5 411 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 FUT9Q9Y231 359 aa3.36□□□□□ -1.87
CLK3-219ENST00000567805 IGLV2-18A0A075B6J9 118 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 IGKV2-40A0A087WW87 121 aaPredicted RBP3.35□□□□□ -1.87
CLK3-219ENST00000567805 TRBV7-9A0A0J9YWB2 115 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 GAGE12BA1L429 117 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 RBAKDNA6NC62 111 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 PRSS29PA6NIE9 313 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 H3BNG1 76 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 RTL8CO15255 209 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms