RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 SMAD5-AS1Q9Y6J3 95 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 IGKV2-40A0A087WW87 121 aaPredicted RBP13.72□□□□□ -0.21
CMTM3-214ENST00000567572 IGKV2D-40P01614 121 aaPredicted RBP13.72□□□□□ -0.21
CMTM3-214ENST00000567572 IGHV4-38-2P0DP08 117 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 FAM104BQ5XKR9 115 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 LYZL1Q6UWQ5 148 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 MS4A6AQ9H2W1 248 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 CSMD2Q7Z408 3487 aa13.71□□□□□ -0.21
CMTM3-214ENST00000567572 RHOGP84095 191 aa13.71□□□□□ -0.21
CMTM3-214ENST00000567572 MAJINQ3KP22 176 aa13.71□□□□□ -0.21
CMTM3-214ENST00000567572 MRPL53Q96EL3 112 aaKnown RBP13.71□□□□□ -0.21
CMTM3-214ENST00000567572 MEGF9Q9H1U4 602 aa13.71□□□□□ -0.21
CMTM3-214ENST00000567572 TRBV7-1A0A0A6YYK4 115 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 ATP6V0E1O15342 81 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 IGLC6P0CF74 106 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 KRTAP10-9P60411 292 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 LINC01545Q5VT33 79 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 ORMDL3Q8N138 153 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 PIFOQ8TCI5 191 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 CNFNQ9BYD5 112 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 HIF1ANQ9NWT6 349 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 KMT2BQ9UMN6 2715 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-214ENST00000567572 ABCA1O95477 2261 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 BUB3O43684 328 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 IGHG4P01861 327 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 GATA3P23771 443 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 G0S2P27469 103 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 GPR183P32249 361 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 C5orf56Q8N8D9 126 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 TPPP3Q9BW30 176 aa13.7□□□□□ -0.22
CMTM3-214ENST00000567572 CSMD1Q96PZ7 3565 aa13.69□□□□□ -0.22
CMTM3-214ENST00000567572 FER1L6-AS1Q8NA97 138 aa13.69□□□□□ -0.22
CMTM3-214ENST00000567572 CELSR1Q9NYQ6 3014 aa13.69□□□□□ -0.22
CMTM3-214ENST00000567572 CRIP2P52943 208 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-214ENST00000567572 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 LINC00173Q6ZV60 143 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 ZNF747Q9BV97 191 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 NPFFR1Q9GZQ6 430 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 GOLT1BQ9Y3E0 138 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 ANKRD17O75179 2603 aaKnown RBP13.68□□□□□ -0.22
CMTM3-214ENST00000567572 CENPEQ02224 2701 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 PRELID3AQ96N28 172 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 MOB4Q9Y3A3 225 aa13.68□□□□□ -0.22
CMTM3-214ENST00000567572 USP9YO00507 2555 aaPredicted RBP13.67□□□□□ -0.22
CMTM3-214ENST00000567572 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 CSN3P07498 182 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 LINC01559Q495D7 138 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 STPG4Q8N801 248 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 DPF1Q92782 380 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 ASCL2Q99929 193 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 VGLL1Q99990 258 aa13.67□□□□□ -0.22
CMTM3-214ENST00000567572 BEX4Q9NWD9 120 aaPredicted RBP13.67□□□□□ -0.22
CMTM3-214ENST00000567572 MAP1AP78559 2803 aaPredicted RBP13.67□□□□□ -0.22
CMTM3-214ENST00000567572 D6R8Y8 96 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 AVPP01185 164 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 PPBPP02775 128 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 CLEC3BP05452 202 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 ZNF138P52744 262 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 TMEM219Q86XT9 240 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 LINC01356Q8N9X3 169 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 CHD6Q8TD26 2715 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 SLC25A34Q6PIV7 304 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 ORAOV1Q8WV07 137 aa13.66□□□□□ -0.22
CMTM3-214ENST00000567572 TMEM213A2RRL7 107 aa13.65□□□□□ -0.22
CMTM3-214ENST00000567572 FAM223BA6NKX1 122 aa13.65□□□□□ -0.22
CMTM3-214ENST00000567572 FAM223AQ8IWN6 122 aa13.65□□□□□ -0.22
CMTM3-214ENST00000567572 METTL26Q96S19 204 aa13.65□□□□□ -0.22
CMTM3-214ENST00000567572 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
CMTM3-214ENST00000567572 TMSB15BA0A087X1C1 80 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 CLPSL1A2RUU4 121 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-214ENST00000567572 DEFB113Q30KQ7 82 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 MRPL51Q4U2R6 128 aaKnown RBP13.64□□□□□ -0.23
CMTM3-214ENST00000567572 AMN1Q8IY45 258 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 LRRC75A-AS1Q8N1F1 130 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 Q8TAT8 98 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 SCRT2Q9NQ03 307 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 SIGLEC8Q9NYZ4 499 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.64□□□□□ -0.234e-6■■□□□ 13.3
CMTM3-214ENST00000567572 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 ZNF80P51504 273 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-214ENST00000567572 HIST1H1AQ02539 215 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-214ENST00000567572 U3KQE9 123 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 TENM4Q6N022 2769 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 POLQO75417 2590 aa13.64□□□□□ -0.23
CMTM3-214ENST00000567572 C19orf54Q5BKX5 351 aa13.63□□□□□ -0.23
CMTM3-214ENST00000567572 PSMG3-AS1Q96PY0 264 aa13.63□□□□□ -0.23
CMTM3-214ENST00000567572 J3QLI3 93 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 BRI3O95415 125 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 IFI27P40305 119 aaPredicted RBP13.62□□□□□ -0.23
CMTM3-214ENST00000567572 TFPI2P48307 235 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 TWIST1Q15672 202 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 hDV102S1A0JD36 115 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms