RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MAJINQ3KP22 176 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 MPV17L2Q567V2 206 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 RNASEKQ6P5S7 137 aaKnown RBP18.07■□□□□ 0.48
LINC00543-201ENST00000567234 LRRC75A-AS1Q8N1F1 130 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 EEF1AKMT3Q96AZ1 226 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 GPR82Q96P67 336 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 FAM231BA6NCW3 169 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 H3BUX3 64 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 AVPP01185 164 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 IGF1P05019 195 aa18.07■□□□□ 0.48
LINC00543-201ENST00000567234 PDZD2O15018 2839 aa18.06■□□□□ 0.48
LINC00543-201ENST00000567234 H3BTX0 84 aa18.06■□□□□ 0.48
LINC00543-201ENST00000567234 BRI3O95415 125 aa18.06■□□□□ 0.48
LINC00543-201ENST00000567234 ZNF414Q96IQ9 312 aa18.06■□□□□ 0.48
LINC00543-201ENST00000567234 RABAC1Q9UI14 185 aa18.06■□□□□ 0.48
LINC00543-201ENST00000567234 TRBV6-1A0A0K0K1D8 114 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 CIDEAO60543 219 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 MLST8Q9BVC4 326 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 GFRA4Q9GZZ7 299 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 SCRT2Q9NQ03 307 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 CBY3A6NI87 242 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 FAM223BA6NKX1 122 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 NUDT3O95989 172 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 LTAP01374 205 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 IGHG2P01859 326 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 RPL7P18124 248 aaKnown RBP18.05■□□□□ 0.48
LINC00543-201ENST00000567234 GPR183P32249 361 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 SLC35B1P78383 322 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 Q5PR19 223 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 SIGLEC15Q6ZMC9 328 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 FAM223AQ8IWN6 122 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 HSPB8Q9UJY1 196 aa18.05■□□□□ 0.48
LINC00543-201ENST00000567234 CLEC3BP05452 202 aa18.04■□□□□ 0.48
LINC00543-201ENST00000567234 HBBP68871 147 aa18.04■□□□□ 0.48
LINC00543-201ENST00000567234 Q6ZVH6 145 aa18.04■□□□□ 0.48
LINC00543-201ENST00000567234 KRTAP1-3Q8IUG1 177 aa18.04■□□□□ 0.48
LINC00543-201ENST00000567234 MAPK1IP1LQ8NDC0 245 aa18.04■□□□□ 0.48
LINC00543-201ENST00000567234 RAB9AP51151 201 aa18.03■□□□□ 0.48
LINC00543-201ENST00000567234 GTF2H5Q6ZYL4 71 aa18.03■□□□□ 0.48
LINC00543-201ENST00000567234 SPATA12Q7Z6I5 190 aa18.03■□□□□ 0.48
LINC00543-201ENST00000567234 BCL6BQ8N143 479 aaPredicted RBP18.03■□□□□ 0.48
LINC00543-201ENST00000567234 NUDT11Q96G61 164 aa18.03■□□□□ 0.48
LINC00543-201ENST00000567234 CCDC140Q96MF4 163 aa18.03■□□□□ 0.48
LINC00543-201ENST00000567234 RPH3ALQ9UNE2 315 aa18.03■□□□□ 0.48
LINC00543-201ENST00000567234 H3BUA1 57 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 LEPROTL1O95214 131 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 ATP5G2Q06055 141 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 GDF5OSQ5U4N7 250 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 EXOC3-AS1Q8N2X6 119 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 NDFIP1Q9BT67 221 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 MAP1LC3CQ9BXW4 147 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 ZNF492Q9P255 531 aa18.02■□□□□ 0.48
LINC00543-201ENST00000567234 GAGE12BA1L429 117 aa18.02■□□□□ 0.47
LINC00543-201ENST00000567234 LY6EQ16553 131 aa18.02■□□□□ 0.47
LINC00543-201ENST00000567234 CR1P17927 2039 aa18.01■□□□□ 0.47
LINC00543-201ENST00000567234 PRRC2AP48634 2157 aaKnown RBP18.01■□□□□ 0.47
LINC00543-201ENST00000567234 M0QZ24 198 aa18.01■□□□□ 0.47
LINC00543-201ENST00000567234 C17orf77Q96MU5 243 aa18.01■□□□□ 0.47
LINC00543-201ENST00000567234 ZFAND3Q9H8U3 227 aa18.01■□□□□ 0.47
LINC00543-201ENST00000567234 A8MWL6 223 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 PSG9Q00887 426 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 CCDC168Q8NDH2 2452 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 RNF223E7ERA6 249 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 K7EQM0 130 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 AMMECR1LQ6DCA0 310 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 CLEC19AQ6UXS0 136 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 TMEM75Q8N9X5 138 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 URB1-AS1Q96HZ7 61 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 AAMDCQ9H7C9 122 aa18■□□□□ 0.47
LINC00543-201ENST00000567234 HIGD1CA8MV81 97 aa17.99■□□□□ 0.47
LINC00543-201ENST00000567234 TGFAP01135 160 aa17.99■□□□□ 0.47
LINC00543-201ENST00000567234 Q86TA4 180 aa17.99■□□□□ 0.47
LINC00543-201ENST00000567234 IGHV1-24A0A0C4DH33 117 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 SERTM2A0A1B0GWG4 89 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 IGLV2-11P01706 119 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 GOLT1AQ6ZVE7 132 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 Q96MF0 132 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 ZNF580Q9UK33 172 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 MUC21A0A0G2JKD1 596 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 MUC21A0A140T8X8 626 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 COX8AP10176 69 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 PPIFP30405 207 aaKnown RBP17.98■□□□□ 0.47
LINC00543-201ENST00000567234 MUC21Q5SSG8 566 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 LINC01545Q5VT33 79 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 PRSS22Q9GZN4 317 aa17.98■□□□□ 0.47
LINC00543-201ENST00000567234 TMEM238C9JI98 176 aa17.97■□□□□ 0.47
LINC00543-201ENST00000567234 TRGV3P03979 118 aa17.97■□□□□ 0.47
LINC00543-201ENST00000567234 USMG5Q96IX5 58 aa17.97■□□□□ 0.47
LINC00543-201ENST00000567234 SGK494Q96LW2 274 aa17.97■□□□□ 0.47
LINC00543-201ENST00000567234 RPP21Q9H633 154 aaKnown RBP17.96■□□□□ 0.47
LINC00543-201ENST00000567234 CSPG4Q6UVK1 2322 aa17.96■□□□□ 0.47
LINC00543-201ENST00000567234 CELSR1Q9NYQ6 3014 aa17.96■□□□□ 0.47
LINC00543-201ENST00000567234 ZANQ9Y493 2812 aa17.96■□□□□ 0.47
LINC00543-201ENST00000567234 IGHV4-31P0DP07 118 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 PSMG4Q5JS54 123 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 UFSP1Q6NVU6 142 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 PRSS57Q6UWY2 283 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 ZNF469Q96JG9 3925 aaPredicted RBP17.95■□□□□ 0.46
LINC00543-201ENST00000567234 C19orf71A6NCJ1 209 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 A6NDN8 102 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms