RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
CDH1-210ENST00000566612 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
CDH1-210ENST00000566612 HOXB4P17483 251 aaPredicted RBP9.11□□□□□ -0.95
CDH1-210ENST00000566612 IL17RELQ6ZVW7 336 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 OR4X2Q8NGF9 303 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 TRBV7-1A0A0A6YYK4 115 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
CDH1-210ENST00000566612 IGLV2-8P01709 118 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 SNRPD3P62318 126 aaKnown RBP9.11□□□□□ -0.95
CDH1-210ENST00000566612 ZNF56Q15929 161 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 A0A087X0K7 114 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 IGHV7-81A0A0B4J1V7 117 aa9.11□□□□□ -0.95
CDH1-210ENST00000566612 NDUFA3O95167 84 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 LINC00322Q6ZN03 302 aaPredicted RBP9.1□□□□□ -0.95
CDH1-210ENST00000566612 GTF2H5Q6ZYL4 71 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 BOD1L1Q8NFC6 3051 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 IGHV1-24A0A0C4DH33 117 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 INS-IGF2F8WCM5 200 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 OVOL3O00110 214 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 IGLC2P0DOY2 106 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 IGLL1P15814 213 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 FAM231BA6NCW3 169 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 HAX1O00165 279 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 CRYGCP07315 174 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 CD7P09564 240 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 ZNF688P0C7X2 276 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 LURAP1LQ8IV03 231 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 C11orf44Q8N8P7 122 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 SCGB3A1Q96QR1 104 aa9.1□□□□□ -0.95
CDH1-210ENST00000566612 STPG4Q8N801 248 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 ST20Q9HBF5 79 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 TRAV21A0A0B4J279 112 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 PPBPP02775 128 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 CDSNQ15517 529 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 DGAT2L7PQ6IED9 249 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 TEX43Q6ZNM6 134 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 TTC9CQ8N5M4 171 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 HIST1H4GQ99525 98 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
CDH1-210ENST00000566612 IGHV1-69DA0A0B4J2H0 117 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 IGHV1-69P01742 117 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 CTSGP08311 255 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 PRSS57Q6UWY2 283 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
CDH1-210ENST00000566612 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 FCN3O75636 299 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 RHPN1-AS1Q9BWJ2 59 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
CDH1-210ENST00000566612 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 B4DSR2 109 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 Q1RN00 199 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 PSMG4Q5JS54 123 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 NXT2Q9NPJ8 142 aaKnown RBP9.08□□□□□ -0.96
CDH1-210ENST00000566612 SPRY2O43597 315 aa9.08□□□□□ -0.96
CDH1-210ENST00000566612 C14orf178Q8N769 122 aaPredicted RBP9.08□□□□□ -0.96
CDH1-210ENST00000566612 EGR2P11161 476 aaPredicted RBP9.07□□□□□ -0.96
CDH1-210ENST00000566612 MRPL51Q4U2R6 128 aaKnown RBP9.07□□□□□ -0.96
CDH1-210ENST00000566612 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 DYNAPQ8N1N2 210 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 ATP5LO75964 103 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 PLP1P60201 277 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 NPBQ8NG41 125 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 FANCD2OSQ96PS1 177 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.07□□□□□ -0.96
CDH1-210ENST00000566612 DLEU1O43261 78 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 HERVK_113P61574 105 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 C1orf122Q6ZSJ8 110 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 BCL6BQ8N143 479 aaPredicted RBP9.07□□□□□ -0.96
CDH1-210ENST00000566612 Q8N9W7 124 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 MSMBP08118 114 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
CDH1-210ENST00000566612 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 OR11H12B2RN74 326 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 ZNF124Q15973 351 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 FBXL19-AS1Q494R0 122 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 C9orf139Q6ZV77 190 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 WIPF2Q8TF74 440 aaPredicted RBP9.06□□□□□ -0.96
CDH1-210ENST00000566612 KLF12Q9Y4X4 402 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 GDF5OSQ5U4N7 250 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 GTSCR1Q86UQ5 136 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 OR1N2Q8NGR9 330 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 ZNF292O60281 2723 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 MSRB1Q9NZV6 116 aa9.06□□□□□ -0.96
CDH1-210ENST00000566612 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 TRAV12-3A0A0B4J271 114 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 A0A1W2PRX2 142 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 OVOL1O14753 267 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 NRGNQ92686 78 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms