RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 U3KQK5 164 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 NMUP48645 174 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 RNF182Q8N6D2 247 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 IFI27L1Q96BM0 104 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 ZFHX3Q15911 3703 aa11.08□□□□□ -0.64
CDH1-209ENST00000566510 TRAV8-6A0A0B4J262 113 aa11.07□□□□□ -0.64
CDH1-209ENST00000566510 ZNF48Q96MX3 618 aaPredicted RBP11.07□□□□□ -0.64
CDH1-209ENST00000566510 C15orf32Q32M92 178 aa11.07□□□□□ -0.64
CDH1-209ENST00000566510 EVI2AP22794 236 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 RPS20P60866 119 aaKnown RBP11.06□□□□□ -0.64
CDH1-209ENST00000566510 LGALS9BQ3B8N2 356 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 PEF1Q9UBV8 284 aaKnown RBP11.06□□□□□ -0.64
CDH1-209ENST00000566510 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 IGHG4P01861 327 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 CLEC3BP05452 202 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
CDH1-209ENST00000566510 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
CDH1-209ENST00000566510 PRAC2D3DTV9 90 aa11.05□□□□□ -0.64
CDH1-209ENST00000566510 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
CDH1-209ENST00000566510 FGF6P10767 208 aa11.05□□□□□ -0.64
CDH1-209ENST00000566510 ZFP36P26651 326 aaKnown RBP11.05□□□□□ -0.64
CDH1-209ENST00000566510 NAA38Q9BRA0 125 aaKnown RBP11.05□□□□□ -0.64
CDH1-209ENST00000566510 MAP1LC3AQ9H492 121 aa11.05□□□□□ -0.64
CDH1-209ENST00000566510 NDUFS7O75251 213 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 IL17RELQ6ZVW7 336 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 CST9LQ9H4G1 147 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 A1L4Q6 167 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 ZNF207O43670 478 aaKnown RBP11.04□□□□□ -0.64
CDH1-209ENST00000566510 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 LEPP41159 167 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 PCP2Q8IVA1 136 aa11.04□□□□□ -0.64
CDH1-209ENST00000566510 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 SEC11AP67812 179 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 OR1N2Q8NGR9 330 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 RAB37Q96AX2 223 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 MSRB2Q9Y3D2 182 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 SMAD7O15105 426 aaKnown RBP11.03□□□□□ -0.64
CDH1-209ENST00000566510 PRSS1P07477 247 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 GATA1P15976 413 aaPredicted RBP11.03□□□□□ -0.64
CDH1-209ENST00000566510 CDKN1BP46527 198 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 FBXL19-AS1Q494R0 122 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 Q8N6K4 173 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 Q8N9W7 124 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 VPS25Q9BRG1 176 aa11.03□□□□□ -0.64
CDH1-209ENST00000566510 GAGE10A6NGK3 116 aa11.02□□□□□ -0.64
CDH1-209ENST00000566510 FBLL1A6NHQ2 334 aaKnown RBP11.02□□□□□ -0.64
CDH1-209ENST00000566510 COX8CQ7Z4L0 72 aa11.02□□□□□ -0.64
CDH1-209ENST00000566510 ZNF575Q86XF7 245 aa11.02□□□□□ -0.64
CDH1-209ENST00000566510 BOD1L2Q8IYS8 172 aa11.02□□□□□ -0.64
CDH1-209ENST00000566510 A6NDN8 102 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 S100A7P31151 101 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 PAX8Q06710 450 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 TM4SF20Q53R12 229 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 CELSR1Q9NYQ6 3014 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 G3V318 75 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 ATP6V0E1O15342 81 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 GOSR1O95249 250 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 ADORA2A-AS1P86434 159 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 DPF1Q92782 380 aa11.02□□□□□ -0.65
CDH1-209ENST00000566510 H3BUT2 72 aa11.01□□□□□ -0.65
CDH1-209ENST00000566510 BUB3O43684 328 aa11.01□□□□□ -0.65
CDH1-209ENST00000566510 NBL1P41271 181 aa11.01□□□□□ -0.65
CDH1-209ENST00000566510 MINOS1Q5TGZ0 78 aa11.01□□□□□ -0.65
CDH1-209ENST00000566510 MINOS1-NBL1R4GNA1 71 aa11.01□□□□□ -0.65
CDH1-209ENST00000566510 C11orf71Q6IPW1 123 aa11□□□□□ -0.65
CDH1-209ENST00000566510 ARL6IP6Q8N6S5 226 aa11□□□□□ -0.65
CDH1-209ENST00000566510 ZNF502Q8TBZ5 544 aa11□□□□□ -0.65
CDH1-209ENST00000566510 SPTAN1Q13813 2472 aaKnown RBP11□□□□□ -0.65
CDH1-209ENST00000566510 LINC01548A6NM66 108 aa11□□□□□ -0.65
CDH1-209ENST00000566510 OOSP1A8MZH6 123 aa11□□□□□ -0.65
CDH1-209ENST00000566510 PPBPP02775 128 aa11□□□□□ -0.65
CDH1-209ENST00000566510 EBI3Q14213 229 aa11□□□□□ -0.65
CDH1-209ENST00000566510 KIR3DS1Q14943 382 aa11□□□□□ -0.65
CDH1-209ENST00000566510 DTX2Q86UW9 622 aa11□□□□□ -0.65
CDH1-209ENST00000566510 OR9G4Q8NGQ1 327 aa11□□□□□ -0.65
CDH1-209ENST00000566510 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
CDH1-209ENST00000566510 HSD52Q0P140 79 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 C1orf122Q6ZSJ8 110 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 TTTY13Q9BZ97 58 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 TMEM78Q5T7P6 136 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 FAM110DQ8TAY7 271 aaPredicted RBP10.99□□□□□ -0.65
CDH1-209ENST00000566510 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
CDH1-209ENST00000566510 MAP1AP78559 2803 aaPredicted RBP10.98□□□□□ -0.65
CDH1-209ENST00000566510 TRAV26-2A0A0B4J265 109 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 J3KRW8 73 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 TRGV3P03979 118 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 TMEM158Q8WZ71 300 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 COL25A1Q9BXS0 654 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms