RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 LINC00477Q96M19 166 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 VGLL1Q99990 258 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 SMIM3Q9BZL3 60 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 WFDC1Q9HC57 220 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 MBD2Q9UBB5 411 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 IGKV2-40A0A087WW87 121 aaPredicted RBP10.25□□□□□ -0.77
FANCA-220ENST00000566409 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 IGKV2D-40P01614 121 aaPredicted RBP10.25□□□□□ -0.77
FANCA-220ENST00000566409 SLC25A5P05141 298 aaKnown RBP10.25□□□□□ -0.77
FANCA-220ENST00000566409 RPL12P30050 165 aaKnown RBP10.25□□□□□ -0.77
FANCA-220ENST00000566409 PRR9Q5T870 116 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 FAM122CQ6P4D5 195 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 Q6ZQT7 251 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 C15orf53Q8NAA6 179 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 RNF141Q8WVD5 230 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 PHYHIPLQ96FC7 376 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 PAXXQ9BUH6 204 aa10.25□□□□□ -0.77
FANCA-220ENST00000566409 MRPL32Q9BYC8 188 aaKnown RBP10.25□□□□□ -0.77
FANCA-220ENST00000566409 HERC2O95714 4834 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 KIAA1109Q2LD37 5005 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 C7orf71A4D174 169 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 EIF3GO75821 320 aaKnown RBP eCLIP10.24□□□□□ -0.77
FANCA-220ENST00000566409 CRISP2P16562 243 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 LINC00336Q6ZUF6 198 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 CCDC28AQ8IWP9 274 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 PYGO2Q9BRQ0 406 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 AAMDCQ9H7C9 122 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 KCNIP2Q9NS61 270 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 ALG5Q9Y673 324 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 MUC4Q99102 2169 aa10.24□□□□□ -0.77
FANCA-220ENST00000566409 DNAH11Q96DT5 4516 aa10.23□□□□□ -0.77
FANCA-220ENST00000566409 C17orf112F2Z3M2 114 aa10.23□□□□□ -0.77
FANCA-220ENST00000566409 NUDT3O95989 172 aa10.23□□□□□ -0.77
FANCA-220ENST00000566409 PET100P0DJ07 73 aa10.23□□□□□ -0.77
FANCA-220ENST00000566409 HOXA5P20719 270 aa10.23□□□□□ -0.77
FANCA-220ENST00000566409 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
FANCA-220ENST00000566409 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
FANCA-220ENST00000566409 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 GAGE7O76087 117 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 GAGE12FP0CL80 117 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 GAGE12GP0CL81 117 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 GAGE12IP0CL82 117 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 DAZ2Q13117 558 aaKnown RBP10.22□□□□□ -0.77
FANCA-220ENST00000566409 Q6ZTI0 123 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
FANCA-220ENST00000566409 DYNC1H1Q14204 4646 aaKnown RBP10.22□□□□□ -0.77
FANCA-220ENST00000566409 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 SNURFLB1AK76 121 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 OR7C2O60412 319 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 GPX1P07203 203 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 NMBP08949 121 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 RANP62826 216 aaKnown RBP10.21□□□□□ -0.77
FANCA-220ENST00000566409 OR5I1Q13606 314 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 Q8TAT8 98 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 SCGB1C1Q8TD33 95 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 TP53TG3Q9ULZ0 132 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 LINC00588Q9Y4M8 146 aa10.21□□□□□ -0.77
FANCA-220ENST00000566409 TRAV26-1A0A087WT03 109 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 IFNA5P01569 189 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 TMEM78Q5T7P6 136 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 Q9H3A6 140 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 TMPRSS5Q9H3S3 457 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 KLF12Q9Y4X4 402 aa10.2□□□□□ -0.78
FANCA-220ENST00000566409 A0A0J9YY99 117 aa10.19□□□□□ -0.78
FANCA-220ENST00000566409 ZNF138P52744 262 aa10.19□□□□□ -0.78
FANCA-220ENST00000566409 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
FANCA-220ENST00000566409 UBE2L3P68036 154 aaKnown RBP10.19□□□□□ -0.78
FANCA-220ENST00000566409 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
FANCA-220ENST00000566409 EIF4E3Q8N5X7 224 aaKnown RBP10.19□□□□□ -0.78
FANCA-220ENST00000566409 ATG101Q9BSB4 218 aa10.19□□□□□ -0.78
FANCA-220ENST00000566409 PTTG1O95997 202 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 M6PRP20645 277 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 RAB2AP61019 212 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 KHDC3LQ587J8 217 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 Q5BKY6 102 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 ZNF680Q8NEM1 530 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 RXFP4Q8TDU9 374 aa10.18□□□□□ -0.78
FANCA-220ENST00000566409 TRBV7-9A0A0J9YWB2 115 aa10.17□□□□□ -0.78
FANCA-220ENST00000566409 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
FANCA-220ENST00000566409 DIRC3C9JPN6 131 aa10.17□□□□□ -0.78
FANCA-220ENST00000566409 SPINK4O60575 86 aa10.17□□□□□ -0.78
FANCA-220ENST00000566409 TCL1AP56279 114 aa10.17□□□□□ -0.78
FANCA-220ENST00000566409 GNPNAT1Q96EK6 184 aaPredicted RBP10.17□□□□□ -0.78
FANCA-220ENST00000566409 C18orf15Q96N68 181 aa10.17□□□□□ -0.78
FANCA-220ENST00000566409 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 RGS13O14921 159 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 CSN1S1P47710 185 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 CCL18P55774 89 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 TAS2R45P59539 299 aa10.16□□□□□ -0.78
FANCA-220ENST00000566409 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms