RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 IGHG4P01861 327 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 PPBPP02775 128 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 HLA-DMBP28068 263 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 ID1P41134 155 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
LINC00563-201ENST00000566370 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 IGFL4Q6B9Z1 124 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 ZNF705AQ6ZN79 300 aaPredicted RBP10.27□□□□□ -0.77
LINC00563-201ENST00000566370 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 LINC00477Q96M19 166 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 MAP1LC3CQ9BXW4 147 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 DOPEY1Q5JWR5 2465 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 LRBAP50851 2863 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 K7EMT4 169 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 M0R143 59 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 IGLC6P0CF74 106 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 RNF224P0DH78 156 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 ERCC8Q13216 396 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 SPATA45Q537H7 98 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 LURAP1LQ8IV03 231 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 OR10AG1Q8NH19 301 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 PRELID3AQ96N28 172 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
LINC00563-201ENST00000566370 PEF1Q9UBV8 284 aaKnown RBP10.26□□□□□ -0.77
LINC00563-201ENST00000566370 LAMTOR2Q9Y2Q5 125 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
LINC00563-201ENST00000566370 TRAV8-2A0A0B4J237 113 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 IGHV1-24A0A0C4DH33 117 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 HSBP1L1C9JCN9 74 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 IGHV3-11P01762 117 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 PRB1P04280 392 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 CD33P20138 364 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 RPL11P62913 178 aaKnown RBP10.25□□□□□ -0.77
LINC00563-201ENST00000566370 CACNG7P62955 275 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 DEFB112Q30KQ8 113 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 IL17RELQ6ZVW7 336 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 UQCR10Q9UDW1 63 aa10.25□□□□□ -0.77
LINC00563-201ENST00000566370 IGHV7-4-1A0A0J9YVY3 117 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 CKS2P33552 79 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 BLCAPP62952 87 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 PET117Q6UWS5 81 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 PRAC2D3DTV9 90 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 CSN3P07498 182 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
LINC00563-201ENST00000566370 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 Q71RC1 249 aaPredicted RBP10.24□□□□□ -0.77
LINC00563-201ENST00000566370 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 U3KQK5 164 aa10.24□□□□□ -0.77
LINC00563-201ENST00000566370 TRAV9-2A0A087WT02 112 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 A1L4Q6 167 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 TMEM213A2RRL7 107 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 D6R8Y8 96 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 AVPP01185 164 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 CFHR3Q02985 330 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 FOXE3Q13461 319 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 GPHB5Q86YW7 130 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 Q8N976 141 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 NRGNQ92686 78 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 RHPN1-AS1Q9BWJ2 59 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 MAP1LC3AQ9H492 121 aa10.23□□□□□ -0.77
LINC00563-201ENST00000566370 A0A096LNT2 108 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 TRAV21A0A0B4J279 112 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
LINC00563-201ENST00000566370 IGHV4-59P01825 116 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 ELANEP08246 267 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 MRPL51Q4U2R6 128 aaKnown RBP10.22□□□□□ -0.77
LINC00563-201ENST00000566370 EBLN2Q6P2I7 272 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 AMN1Q8IY45 258 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 SMPXQ9UHP9 88 aa10.22□□□□□ -0.77
LINC00563-201ENST00000566370 RNF223E7ERA6 249 aa10.21□□□□□ -0.78
LINC00563-201ENST00000566370 TRBV12-3P01733 135 aa10.21□□□□□ -0.78
LINC00563-201ENST00000566370 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.78
LINC00563-201ENST00000566370 Q5PR19 223 aa10.21□□□□□ -0.78
LINC00563-201ENST00000566370 UNQ9165/PRO28630Q6UXU0 137 aa10.21□□□□□ -0.78
LINC00563-201ENST00000566370 KLK15Q9H2R5 256 aa10.21□□□□□ -0.78
LINC00563-201ENST00000566370 AKAP6Q13023 2319 aa10.21□□□□□ -0.78
LINC00563-201ENST00000566370 MED13LQ71F56 2210 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 OR4C46A6NHA9 309 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 M0QZ24 198 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 SMAD7O15105 426 aaKnown RBP10.2□□□□□ -0.78
LINC00563-201ENST00000566370 IGHV4-31P0DP07 118 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 PSMB8P28062 276 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 HNRNPA3P51991 378 aaKnown RBP10.2□□□□□ -0.78
LINC00563-201ENST00000566370 PRSS57Q6UWY2 283 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 BBC3Q96PG8 261 aaPredicted RBP10.2□□□□□ -0.78
LINC00563-201ENST00000566370 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
LINC00563-201ENST00000566370 RNF114Q9Y508 228 aa10.2□□□□□ -0.78
LINC00563-201ENST00000566370 TCF21O43680 179 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms