RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 A0A1B0GVG6 124 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 M0R2Z0 102 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 CRXO43186 299 aaPredicted RBP9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 CT45A10P0DMU9 189 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 PPT1P50897 306 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 ZNF138P52744 262 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 RRN3P1Q2M238 152 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 IQCF2Q8IXL9 164 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 Q8NAQ8 132 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 C5orf17Q8NAS9 161 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 MAP1LC3BQ9GZQ8 125 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 ZNF492Q9P255 531 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
SHCBP1-204ENST00000565887 IGHV3OR16-12A0A075B7B8 117 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 TEX48A0A1B0GUV7 120 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 H7BYZ3 331 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 H2AFB1P0C5Y9 115 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 CRISP2P16562 243 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 TAS2R60P59551 318 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 SUMO1P63165 101 aaKnown RBP9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 FAM213BQ8TBF2 198 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 SFT2D1Q8WV19 159 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 LINC01587Q99440 93 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
SHCBP1-204ENST00000565887 IGHV4-28A0A0C4DH34 117 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 F6UZH7 168 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 EIF3GO75821 320 aaKnown RBP eCLIP9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 GPX1P07203 203 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 FHITP49789 147 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 ERCC8Q13216 396 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 C9orf62Q8N4C0 152 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 FAM19A4Q96LR4 140 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 VGLL1Q99990 258 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 NIPSNAP3BQ9BS92 247 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
SHCBP1-204ENST00000565887 TRAV12-2A0A075B6T6 113 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 IGKV2-40A0A087WW87 121 aaPredicted RBP9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 KLLNB2CW77 178 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 IGKV2D-40P01614 121 aaPredicted RBP9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 SULT1A2P50226 295 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 CCDC28AQ8IWP9 274 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 HIST1H2BAQ96A08 127 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 PYGO2Q9BRQ0 406 aa9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
SHCBP1-204ENST00000565887 C7orf71A4D174 169 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 CXorf65A6NEN9 183 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 IFNA7P01567 189 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 TCRAP04437 139 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 CD300CQ08708 224 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 NDFIP1Q9BT67 221 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
SHCBP1-204ENST00000565887 LOC102723971A0A1B0GUV8 181 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 FAM74A7A6NL05 159 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 C11orf94C9JXX5 98 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 SAPCD1Q5SSQ6 148 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 GFI1BQ5VTD9 330 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 CYB561D1Q8N8Q1 229 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 C16orf74Q96GX8 76 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 TXNDC17Q9BRA2 123 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
SHCBP1-204ENST00000565887 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 NUPR2A6NF83 97 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 DEFB4AO15263 64 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 S100A9P06702 114 aaKnown RBP9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 RNASE4P34096 147 aaKnown RBP9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 UBE2G2P60604 165 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 CASC10Q5T4H9 136 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 CST9LP1Q5W188 147 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 ZFAND2AQ8N6M9 145 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 TMEM75Q8N9X5 138 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 RPH3ALQ9UNE2 315 aa9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 KLK5Q9Y337 293 aaPredicted RBP9.06□□□□□ -0.96
SHCBP1-204ENST00000565887 LYRM9A8MSI8 78 aa9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 PRB4P10163 310 aaPredicted RBP9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 TAGLN2P37802 199 aaKnown RBP9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 TMEM263Q8WUH6 116 aaKnown RBP9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 MANBALQ9NQG1 85 aa9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 YTHDF2Q9Y5A9 579 aaKnown RBP9.05□□□□□ -0.96
SHCBP1-204ENST00000565887 TIMM8BQ9Y5J9 83 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms