RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 AGPAT4-IT1Q9H0P7 198 aa13.88□□□□□ -0.19
CLN6-206ENST00000565471 GAGE12BA1L429 117 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 GAGE7O76087 117 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 GAGE12FP0CL80 117 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 GAGE12GP0CL81 117 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 GAGE12IP0CL82 117 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 CRISP2P16562 243 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 ZNF680Q8NEM1 530 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 LINC00588Q9Y4M8 146 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 FAT2Q9NYQ8 4349 aa13.87□□□□□ -0.19
CLN6-206ENST00000565471 NBDYA0A0U1RRE5 68 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 ZNF324O75467 553 aaPredicted RBP13.86□□□□□ -0.19
CLN6-206ENST00000565471 NMBP08949 121 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 NBEAP1P0C6P0 100 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 M6PRP20645 277 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 H2BFSP57053 126 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 OR5I1Q13606 314 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 ICAM4Q14773 271 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 PPP1R1CQ8WVI7 109 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 GNPNAT1Q96EK6 184 aaPredicted RBP13.86□□□□□ -0.19
CLN6-206ENST00000565471 OR51M1Q9H341 326 aa13.86□□□□□ -0.19
CLN6-206ENST00000565471 TRAV26-1A0A087WT03 109 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 C17orf112F2Z3M2 114 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 H3BNG1 76 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 HOXA5P20719 270 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 FUT9Q9Y231 359 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 DNAH17Q9UFH2 4485 aa13.85□□□□□ -0.19
CLN6-206ENST00000565471 DNAH2Q9P225 4427 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 CD300CQ08708 224 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 BTN1A1Q13410 526 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 ANXA2RQ3ZCQ2 193 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 TMEM78Q5T7P6 136 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 EIF4E3Q8N5X7 224 aaKnown RBP13.84□□□□□ -0.19
CLN6-206ENST00000565471 C11orf72Q8NBR9 251 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 FXYD5Q96DB9 178 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 ATP5SQ99766 215 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 PAXXQ9BUH6 204 aa13.84□□□□□ -0.19
CLN6-206ENST00000565471 IGKV2-40A0A087WW87 121 aaPredicted RBP13.83□□□□□ -0.2
CLN6-206ENST00000565471 IGKV2D-40P01614 121 aaPredicted RBP13.83□□□□□ -0.2
CLN6-206ENST00000565471 GPX1P07203 203 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 PET100P0DJ07 73 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 DEFA1P59665 94 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 DEFA3P59666 94 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 FAM122CQ6P4D5 195 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 Q6ZTI0 123 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 SSX7Q7RTT5 188 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 ZFAND2AQ8N6M9 145 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 KRTAP17-1Q9BYP8 105 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 GSN-AS1Q9NRJ2 163 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 HSPB11Q9Y547 144 aa13.83□□□□□ -0.2
CLN6-206ENST00000565471 TRBV7-9A0A0J9YWB2 115 aa13.82□□□□□ -0.2
CLN6-206ENST00000565471 MPC2O95563 127 aa13.82□□□□□ -0.2
CLN6-206ENST00000565471 OR10J4P0C629 311 aa13.82□□□□□ -0.2
CLN6-206ENST00000565471 RNASE4P34096 147 aaKnown RBP13.82□□□□□ -0.2
CLN6-206ENST00000565471 VGLL1Q99990 258 aa13.82□□□□□ -0.2
CLN6-206ENST00000565471 TMPRSS5Q9H3S3 457 aa13.82□□□□□ -0.2
CLN6-206ENST00000565471 ZNF492Q9P255 531 aa13.82□□□□□ -0.2
CLN6-206ENST00000565471 KIAA1109Q2LD37 5005 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 A0A0J9YY99 117 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 SSNA1O43805 119 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 TCL1AP56279 114 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 IBA57Q5T440 356 aaKnown RBP13.81□□□□□ -0.2
CLN6-206ENST00000565471 LYPD1Q8N2G4 141 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 C6orf223Q8N319 242 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 PHYHIPLQ96FC7 376 aa13.81□□□□□ -0.2
CLN6-206ENST00000565471 TRGV2A0A075B6R0 118 aa13.8□□□□□ -0.2
CLN6-206ENST00000565471 OR7C2O60412 319 aa13.8□□□□□ -0.2
CLN6-206ENST00000565471 PRR9Q5T870 116 aa13.8□□□□□ -0.2
CLN6-206ENST00000565471 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
CLN6-206ENST00000565471 IFNA5P01569 189 aa13.79□□□□□ -0.2
CLN6-206ENST00000565471 ZNF138P52744 262 aa13.79□□□□□ -0.2
CLN6-206ENST00000565471 FFAR4Q5NUL3 377 aa13.79□□□□□ -0.2
CLN6-206ENST00000565471 UPK3BQ9BT76 320 aa13.79□□□□□ -0.2
CLN6-206ENST00000565471 Q9H8V8 135 aa13.79□□□□□ -0.2
CLN6-206ENST00000565471 TRGV1A0A0A0MS02 117 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 RGS13O14921 159 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 SPINK4O60575 86 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 RPL12P30050 165 aaKnown RBP13.78□□□□□ -0.2
CLN6-206ENST00000565471 CSN1S1P47710 185 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 UBE2L3P68036 154 aaKnown RBP13.78□□□□□ -0.2
CLN6-206ENST00000565471 KHDC3LQ587J8 217 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 SCGB1C1Q8TD33 95 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 KLF12Q9Y4X4 402 aa13.78□□□□□ -0.2
CLN6-206ENST00000565471 IGHV1OR15-1A0A075B7D0 117 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 PKHD1P08F94 4074 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 TAS2R45P59539 299 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 RANP62826 216 aaKnown RBP13.77□□□□□ -0.21
CLN6-206ENST00000565471 TNP2Q05952 138 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 ESRGQ1W209 222 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 VSIG2Q96IQ7 327 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 Q9H3A6 140 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 MBD2Q9UBB5 411 aa13.77□□□□□ -0.21
CLN6-206ENST00000565471 Q8TAT8 98 aa13.76□□□□□ -0.21
CLN6-206ENST00000565471 ARPC5LQ9BPX5 153 aa13.76□□□□□ -0.21
CLN6-206ENST00000565471 SMIM3Q9BZL3 60 aa13.76□□□□□ -0.21
CLN6-206ENST00000565471 MRPS16Q9Y3D3 137 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms