RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NUP35Q8NFH5 326 aa9.67□□□□□ -0.86
NSMCE1-208ENST00000565070 C4orf3Q8WVX3 66 aa9.67□□□□□ -0.86
NSMCE1-208ENST00000565070 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
NSMCE1-208ENST00000565070 FBLL1A6NHQ2 334 aaKnown RBP9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 SNURFLB1AK76 121 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 S100A2P29034 98 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 NDUFA11Q86Y39 141 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 ZC2HC1AQ96GY0 325 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 NEU1Q99519 415 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 A8MWL6 223 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 NDUFA4O00483 81 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 SPINK4O60575 86 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 IGHV3-11P01762 117 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 APOHP02749 345 aaPredicted RBP9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 COX8CQ7Z4L0 72 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 OR4B1Q8NGF8 309 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 DAZAP1Q96EP5 407 aaKnown RBP9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 CITED2Q99967 270 aaPredicted RBP9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 GFRA4Q9GZZ7 299 aa9.66□□□□□ -0.86
NSMCE1-208ENST00000565070 ATRQ13535 2644 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 CHEK1O14757 476 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 PDZD11Q5EBL8 140 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 MRPL54Q6P161 138 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 C12orf54Q6X4T0 127 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 GBGT1Q8N5D6 347 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 HIST1H2BLQ99880 126 aa9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 PEF1Q9UBV8 284 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-208ENST00000565070 HLA-DQA1P01909 254 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 ATP5L2Q7Z4Y8 100 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 GTSF1Q8WW33 167 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 CITED1Q99966 193 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 SLC50A1Q9BRV3 221 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 LCN12Q6JVE5 192 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 UNQ9165/PRO28630Q6UXU0 137 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 C3orf56Q8N813 242 aa9.64□□□□□ -0.87
NSMCE1-208ENST00000565070 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 FABP4P15090 132 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 CRIP1P50238 77 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 KRTAP10-3P60369 221 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 IGFL4Q6B9Z1 124 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 OR10D4PQ8NGN7 298 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 GLMPQ8WWB7 406 aa9.63□□□□□ -0.87
NSMCE1-208ENST00000565070 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 IGKV2-40A0A087WW87 121 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 IGKV2D-40P01614 121 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 HLA-DMBP28068 263 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 DPF1Q92782 380 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 PACRGQ96M98 296 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 RBAKDNA6NC62 111 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 ZNF705FA8MVS1 300 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 AMBPP02760 352 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 PRB4P10163 310 aaPredicted RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 CRISP2P16562 243 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 RAB4BP61018 213 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 Q0VG73 95 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 SHISA2Q6UWI4 295 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 RBPMS2Q6ZRY4 209 aaKnown RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 PRR25Q96S07 402 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 ASCL2Q99929 193 aa9.62□□□□□ -0.87
NSMCE1-208ENST00000565070 CT45A10P0DMU9 189 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 PYY3Q5JQD4 70 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 VGLL1Q99990 258 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 NIT2Q9NQR4 276 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 TP53TG3Q9ULZ0 132 aa9.61□□□□□ -0.87
NSMCE1-208ENST00000565070 GRIFINA4D1Z8 144 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 LINC01619G3V211 115 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 APCSP02743 223 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 NSUN5P1Q3KNT7 163 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 TMEM256Q8N2U0 113 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 OR11H1Q8NG94 326 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 GSN-AS1Q9NRJ2 163 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 CLEC5AQ9NY25 188 aa9.6□□□□□ -0.87
NSMCE1-208ENST00000565070 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.87
NSMCE1-208ENST00000565070 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
NSMCE1-208ENST00000565070 ESDP10768 282 aa9.59□□□□□ -0.87
NSMCE1-208ENST00000565070 HBBP68871 147 aa9.59□□□□□ -0.87
NSMCE1-208ENST00000565070 SLAQ13239 276 aa9.59□□□□□ -0.87
NSMCE1-208ENST00000565070 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms