RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ARHGAP11BQ3KRB8 267 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 FAM201AQ5SY85 155 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 SSX8Q7RTT4 187 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 IFT20Q8IY31 132 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 SLC22A24Q8N4F4 322 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 LINC00471Q8N535 108 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 GPR32P1Q8NGA4 272 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 OR2T4Q8NH00 348 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 C10orf105Q8TEF2 133 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 SMCR5Q8TEV8 140 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ACOT12Q8WYK0 555 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ROPN1LQ96C74 230 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ERMAPQ96PL5 475 aaPredicted RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 PAIP2Q9BPZ3 127 aaKnown RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 DPY30Q9C005 99 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 MED29Q9NX70 200 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 PAQR5Q9NXK6 330 aaPredicted RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 TIMM9Q9Y5J7 89 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 FAT2Q9NYQ8 4349 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 HECTD4Q9Y4D8 3996 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ZNF106Q9H2Y7 1883 aaKnown RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 MED12LQ86YW9 2145 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 HEATR5AQ86XA9 2040 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 TMSB15BA0A087X1C1 80 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 M0R036 132 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 LST1O00453 97 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 MRPL33O75394 65 aaKnown RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 TFF1P04155 84 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CRHP06850 196 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 GPX1P07203 203 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 ZNF705DP0CH99 300 aaPredicted RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 S100A3P33764 101 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 PHBP35232 272 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 EFNA4P52798 201 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CEBPGP53567 150 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 DEFA1P59665 94 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 SPCS3P61009 180 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 H3F3AP84243 136 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 AKR1C1Q04828 323 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CCDC153Q494R4 210 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 TNFAIP8L3Q5GJ75 292 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 PABPC1L2AQ5JQF8 200 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 C6orf52Q5T4I8 152 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 C1orf140Q5VVS0 124 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 SFXN4Q6P4A7 337 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 AAED1Q7RTV5 226 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 DCXRQ7Z4W1 244 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 KTN1-AS1Q86SY8 53 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 C20orf196Q8IYI0 205 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 DEFB125Q8N687 156 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CLDN22Q8N7P3 220 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 DEFB108BQ8NET1 73 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 SGMS2Q8NHU3 365 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 SLC7A6Q92536 515 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 MUCL1Q96DR8 90 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CNBD2Q96M20 576 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 OR52E6Q96RD3 313 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 Q9BRP9 147 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 TIMM21Q9BVV7 248 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 MRPL32Q9BYC8 188 aaKnown RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 BPESC1Q9GZL8 116 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CENPHQ9H3R5 247 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CBLN4Q9NTU7 201 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 CMTM6Q9NX76 183 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 RBM7Q9Y580 266 aaKnown RBP1.07□□□□□ -2.24
PALB2-203ENST00000565038 MYCBP2O75592 4640 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 LYSTQ99698 3801 aa1.07□□□□□ -2.24
PALB2-203ENST00000565038 FLG2Q5D862 2391 aaPredicted RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 MALRD1Q5VYJ5 2156 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 IGLV3-9A0A075B6K5 115 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 A0A087WUJ7 227 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 TRAV38-1A0A0B4J264 116 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 A0A1B0GV50 99 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 A0A1B0GWA3 101 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 CPSF4LA6NMK7 179 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 A8MUN3 132 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 INMT-MINDY4F8WBC2 141 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 KPNA4O00629 521 aaPredicted RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 PGLYRP1O75594 196 aaPredicted RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 ANGP03950 147 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 SERPINE1P05121 402 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 DBIP07108 87 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 LGALS1P09382 135 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 HIST1H1EP10412 219 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 CD79AP11912 226 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 NEFHP12036 1026 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 HLA-DMBP28068 263 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 SRP14P37108 136 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 RPL28P46779 137 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 EIF2B2P49770 351 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 IDH3GP51553 393 aaPredicted RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 POLR2HP52434 150 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 POLR2JP52435 117 aaKnown RBP1.06□□□□□ -2.24
PALB2-203ENST00000565038 CCL8P80075 99 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 GLO1Q04760 184 aa1.06□□□□□ -2.24
PALB2-203ENST00000565038 GRK1Q15835 563 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms