RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 PROK1P58294 105 aa11.09□□□□□ -0.63
NIP7-206ENST00000565034 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
NIP7-206ENST00000565034 LINC00322Q6ZN03 302 aaPredicted RBP11.09□□□□□ -0.63
NIP7-206ENST00000565034 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
NIP7-206ENST00000565034 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
NIP7-206ENST00000565034 SVEP1Q4LDE5 3571 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 IZUMO1RA6ND01 250 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 ERCC8Q13216 396 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 FHL3Q13643 280 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 OR10J6PQ8NGY7 276 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 DCANP1Q8TF63 244 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 C20orf173Q96LM9 149 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 C8orf49Q96NF6 230 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 AGPAT4-IT1Q9H0P7 198 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
NIP7-206ENST00000565034 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 HAX1O00165 279 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 FAM162BQ5T6X4 162 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 Q8TAT8 98 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 RAX2Q96IS3 184 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
NIP7-206ENST00000565034 MS4A6AQ9H2W1 248 aa11.07□□□□□ -0.64
NIP7-206ENST00000565034 CSMD1Q96PZ7 3565 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 IGKV3-7A0A075B6H7 116 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 TRBV7-9A0A0J9YWB2 115 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 K7EQG2 157 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 CCL24O00175 119 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
NIP7-206ENST00000565034 TRGC2P03986 189 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 TCL1AP56279 114 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
NIP7-206ENST00000565034 WDR73Q6P4I2 378 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 RASL11AQ6T310 242 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 ZFP82Q8N141 532 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 DLX4Q92988 240 aaPredicted RBP11.06□□□□□ -0.64
NIP7-206ENST00000565034 NEU1Q99519 415 aa11.06□□□□□ -0.64
NIP7-206ENST00000565034 SAV1Q9H4B6 383 aaPredicted RBP11.06□□□□□ -0.64
NIP7-206ENST00000565034 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 SH2D1AO60880 128 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 MT-ND6P03923 174 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 CSN3P07498 182 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
NIP7-206ENST00000565034 CRIP1P50238 77 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 RPS20P60866 119 aaKnown RBP11.05□□□□□ -0.64
NIP7-206ENST00000565034 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
NIP7-206ENST00000565034 ACTL10Q5JWF8 245 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 Q6AWC8 147 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 OR8A1Q8NGG7 326 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 ASCL2Q99929 193 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 GPR61Q9BZJ8 451 aa11.05□□□□□ -0.64
NIP7-206ENST00000565034 ZNF469Q96JG9 3925 aaPredicted RBP11.05□□□□□ -0.64
NIP7-206ENST00000565034 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 A0A1W2PRX2 142 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 FABP5P3A8MUU1 101 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
NIP7-206ENST00000565034 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
NIP7-206ENST00000565034 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 DYNLRB2Q8TF09 96 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
NIP7-206ENST00000565034 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 PHOX2AO14813 284 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 S100A6P06703 90 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 FOXA3P55318 350 aaPredicted RBP11.03□□□□□ -0.64
NIP7-206ENST00000565034 NDUFA11Q86Y39 141 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 NUP35Q8NFH5 326 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 SIGLEC8Q9NYZ4 499 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 TRAPPC1Q9Y5R8 145 aa11.03□□□□□ -0.64
NIP7-206ENST00000565034 TRAV25A0A0B4J276 109 aa11.02□□□□□ -0.65
NIP7-206ENST00000565034 FRZBQ92765 325 aa11.02□□□□□ -0.65
NIP7-206ENST00000565034 AKAP9Q99996 3911 aa11.02□□□□□ -0.65
NIP7-206ENST00000565034 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BKO60814 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BJP06899 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 TRGC1P0CF51 173 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BOP23527 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BBP33778 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 TFPI2P48307 235 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BDP58876 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BCP62807 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST2H2BEQ16778 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.01□□□□□ -0.65
NIP7-206ENST00000565034 GTSF1Q8WW33 167 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BHQ93079 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BNQ99877 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 HIST1H2BMQ99879 126 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 SELENOKQ9Y6D0 94 aa11.01□□□□□ -0.65
NIP7-206ENST00000565034 OTOGQ6ZRI0 2925 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms