RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 HEATR5BQ9P2D3 2071 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 MGAMO43451 1857 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 CDK5RAP2Q96SN8 1893 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 DISP2A7MBM2 1401 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 FAM236AA0A1B0GUQ0 79 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 FAM236BA0A1B0GV22 79 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 C9orf170A2RU37 121 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 J3QR89 54 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 K7ERU9 68 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 CD2P06729 351 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 GPX1P07203 203 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 CD14P08571 375 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 SAA1P0DJI8 122 aaPredicted RBP1.27□□□□□ -2.21
UBR1-205ENST00000564540 RNASE3P12724 160 aaKnown RBP1.27□□□□□ -2.21
UBR1-205ENST00000564540 SNRPD3P62318 126 aaKnown RBP1.27□□□□□ -2.21
UBR1-205ENST00000564540 SPCS2Q15005 226 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 TEN1Q86WV5 123 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 CTAGE3PQ8IX95 158 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 LINC00269Q8N2A0 174 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 FAM19A2Q8N3H0 131 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 MMGT1Q8N4V1 131 aa1.27□□□□□ -2.21
UBR1-205ENST00000564540 COL1A1P02452 1464 aaPredicted RBP1.26□□□□□ -2.21
UBR1-205ENST00000564540 PRG4Q92954 1404 aaPredicted RBP1.26□□□□□ -2.21
UBR1-205ENST00000564540 RP1P56715 2156 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 LINC00587B1AMM8 73 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 ERC2-IT1O76042 136 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 TRACP01848 142 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 CD3DP04234 171 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 COPZ1P61923 177 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 RRAS2P62070 204 aaPredicted RBP1.26□□□□□ -2.21
UBR1-205ENST00000564540 NCS1P62166 190 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 CIRBPQ14011 172 aaKnown RBP1.26□□□□□ -2.21
UBR1-205ENST00000564540 C10orf55Q5SWW7 151 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 GLIPR1L1Q6UWM5 242 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 C15orf53Q8NAA6 179 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 NAA38Q9BRA0 125 aaKnown RBP1.26□□□□□ -2.21
UBR1-205ENST00000564540 CST11Q9H112 138 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 SOX21Q9Y651 276 aaPredicted RBP1.26□□□□□ -2.21
UBR1-205ENST00000564540 STRCP1A6NGW2 1772 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 POLEQ07864 2286 aa1.26□□□□□ -2.21
UBR1-205ENST00000564540 MDC1Q14676 2089 aaKnown RBP1.25□□□□□ -2.21
UBR1-205ENST00000564540 IBTKQ9P2D0 1353 aaPredicted RBP1.25□□□□□ -2.21
UBR1-205ENST00000564540 GBF1Q92538 1859 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 TRBV6-8A0A0A6YYG3 113 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 LOC107986453A0A1B0GWG9 222 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 NPFFO15130 113 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 GNG7O60262 68 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 CXCL8P10145 99 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 HIST1H1BP16401 226 aaKnown RBP1.25□□□□□ -2.21
UBR1-205ENST00000564540 PCBD1P61457 104 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 SELENOWP63302 87 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 MIR22HGQ0VDD5 57 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 NEDD8Q15843 81 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 C2orf82Q6UX34 121 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 FOXI2Q6ZQN5 318 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 Q8N2B8 174 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 OR5AK2Q8NH90 309 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 OTOSQ8NHW6 89 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 ZNF625Q96I27 306 aaPredicted RBP1.25□□□□□ -2.21
UBR1-205ENST00000564540 LINC00470Q9BZP3 86 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 METTL1Q9UBP6 276 aaKnown RBP1.25□□□□□ -2.21
UBR1-205ENST00000564540 COL24A1Q17RW2 1714 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 KIAA1549Q9HCM3 1950 aa1.25□□□□□ -2.21
UBR1-205ENST00000564540 ARHGAP31Q2M1Z3 1444 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 RP1L1Q8IWN7 2480 aaPredicted RBP1.24□□□□□ -2.21
UBR1-205ENST00000564540 FN1P02751 2386 aaKnown RBP1.24□□□□□ -2.21
UBR1-205ENST00000564540 LOC107984156A0A0G2JMH3 177 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 A6NN06 94 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 ZNF670-ZNF695F2Z2N8 137 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 F8W036 122 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 M0R129 80 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 CCL16O15467 120 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 DLEU1O43261 78 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 NCR2O95944 276 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 CKS2P33552 79 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 LSM3P62310 102 aaKnown RBP1.24□□□□□ -2.21
UBR1-205ENST00000564540 CLLU1Q5K131 121 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 TEX261Q6UWH6 196 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 ZCCHC23Q6ZST2 131 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 RPS19BP1Q86WX3 136 aaKnown RBP1.24□□□□□ -2.21
UBR1-205ENST00000564540 ARL17AQ8IVW1 177 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 OR5AS1Q8N127 324 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 C10orf111Q8N326 155 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 OR10AC1Q8NH08 325 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 C1orf54Q8WWF1 131 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 SDF2Q99470 211 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 REG4Q9BYZ8 158 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 SLC35B3Q9H1N7 401 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 LSM2Q9Y333 95 aaKnown RBP1.24□□□□□ -2.21
UBR1-205ENST00000564540 BAZ2BQ9UIF8 2168 aaKnown RBP1.24□□□□□ -2.21
UBR1-205ENST00000564540 LAMB4A4D0S4 1761 aa1.24□□□□□ -2.21
UBR1-205ENST00000564540 RGS12O14924 1447 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 FANCMQ8IYD8 2048 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 PLXNA4Q9HCM2 1894 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 KDM5CP41229 1560 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 C3orf85A0A1B0GTC6 90 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 ZNF736B4DX44 427 aaPredicted RBP1.23□□□□□ -2.21
UBR1-205ENST00000564540 TPST1O60507 370 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms