RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SSX7Q7RTT5 188 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 MRPL32Q9BYC8 188 aaKnown RBP10.46□□□□□ -0.73
SPG7-210ENST00000564409 DNAH17Q9UFH2 4485 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 GAGE12BA1L429 117 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 J3KRW8 73 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 M0R3E3 92 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 ZNF324O75467 553 aaPredicted RBP10.45□□□□□ -0.74
SPG7-210ENST00000564409 UPK1BO75841 260 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 GAGE7O76087 117 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 NBEAP1P0C6P0 100 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 GAGE12FP0CL80 117 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 GAGE12GP0CL81 117 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 GAGE12IP0CL82 117 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 EIF4E3Q8N5X7 224 aaKnown RBP10.45□□□□□ -0.74
SPG7-210ENST00000564409 BLNKQ8WV28 456 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 AGPAT4-IT1Q9H0P7 198 aa10.45□□□□□ -0.74
SPG7-210ENST00000564409 C17orf112F2Z3M2 114 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 GPX1P07203 203 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 PYYP10082 97 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 BTF3P20290 206 aaKnown RBP10.44□□□□□ -0.74
SPG7-210ENST00000564409 ICAM4Q14773 271 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 THAP6Q8TBB0 222 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 FAM167A-AS1Q96KT0 104 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 SLC25A2Q9BXI2 301 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 Q9H8V8 135 aa10.44□□□□□ -0.74
SPG7-210ENST00000564409 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 A0A1W2PPQ1 181 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 PET100P0DJ07 73 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 ERCC8Q13216 396 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 GCSAMLQ5JQS6 135 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 IBA57Q5T440 356 aaKnown RBP10.43□□□□□ -0.74
SPG7-210ENST00000564409 LYPD1Q8N2G4 141 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 EXOC3-AS1Q8N2X6 119 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 C11orf72Q8NBR9 251 aa10.43□□□□□ -0.74
SPG7-210ENST00000564409 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
SPG7-210ENST00000564409 RBAKDNA6NC62 111 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 INMT-MINDY4F8WBC2 141 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 HOXA5P20719 270 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SPG7-210ENST00000564409 CD300CQ08708 224 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 Q6ZTI0 123 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 MIR17HGQ75NE6 70 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 MARVELD1Q9BSK0 173 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 PAXXQ9BUH6 204 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 TMPRSS5Q9H3S3 457 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 GSN-AS1Q9NRJ2 163 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 OR5AC2Q9NZP5 309 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 ZNF492Q9P255 531 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
SPG7-210ENST00000564409 RGS13O14921 159 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 SIX6O95475 246 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 CSN1S1P47710 185 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 TCL1AP56279 114 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 LRRC37A5PQ49AS3 106 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 ZFAND2AQ8N6M9 145 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 FXYD5Q96DB9 178 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 ATP5SQ99766 215 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 Q9H3A6 140 aa10.41□□□□□ -0.74
SPG7-210ENST00000564409 MRPS16Q9Y3D3 137 aaKnown RBP10.41□□□□□ -0.74
SPG7-210ENST00000564409 PKD1P98161 4303 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 TRGV1A0A0A0MS02 117 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 A0A0J9YY99 117 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 H0YIZ8 118 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 SPINK4O60575 86 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 ZNF138P52744 262 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 DEFA1P59665 94 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 DEFA3P59666 94 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 TNP2Q05952 138 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 SLAQ13239 276 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 BTN1A1Q13410 526 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 ESRGQ1W209 222 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 FAM122CQ6P4D5 195 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 PPP1R1CQ8WVI7 109 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 PTTG2Q9NZH5 202 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 LENEPQ9Y5L5 61 aa10.4□□□□□ -0.74
SPG7-210ENST00000564409 IGHV1OR15-1A0A075B7D0 117 aa10.39□□□□□ -0.75
SPG7-210ENST00000564409 IGKV2-40A0A087WW87 121 aaPredicted RBP10.39□□□□□ -0.75
SPG7-210ENST00000564409 OR7C2O60412 319 aa10.39□□□□□ -0.75
SPG7-210ENST00000564409 IGKV2D-40P01614 121 aaPredicted RBP10.39□□□□□ -0.75
SPG7-210ENST00000564409 H2BFSP57053 126 aa10.39□□□□□ -0.75
SPG7-210ENST00000564409 TAS2R45P59539 299 aa10.39□□□□□ -0.75
SPG7-210ENST00000564409 ST6GAL2Q96JF0 529 aa10.39□□□□□ -0.75
SPG7-210ENST00000564409 VGLL1Q99990 258 aa10.39□□□□□ -0.75
SPG7-210ENST00000564409 MPC2O95563 127 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 IFNA5P01569 189 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 OR10J4P0C629 311 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 KHDC3LQ587J8 217 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 SCGB1C1Q8TD33 95 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 VSIG2Q96IQ7 327 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 ARPC5LQ9BPX5 153 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 KLF12Q9Y4X4 402 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 HSPB11Q9Y547 144 aa10.38□□□□□ -0.75
SPG7-210ENST00000564409 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 A6NHS1 94 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms