RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 DIRC3C9JPN6 131 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 K7EQM0 130 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
RNF40-206ENST00000564260 FHITP49789 147 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 CD300CQ08708 224 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 SSX7Q7RTT5 188 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 FAM19A4Q96LR4 140 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 X6R8D5 127 aa12.11□□□□□ -0.47
RNF40-206ENST00000564260 AGRNO00468 2067 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 SULT1A2P50226 295 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 ZNF138P52744 262 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 Q8NAQ8 132 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 FAM213BQ8TBF2 198 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 AGPAT4-IT1Q9H0P7 198 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 ZNF492Q9P255 531 aa12.1□□□□□ -0.47
RNF40-206ENST00000564260 TEX48A0A1B0GUV7 120 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 KLLNB2CW77 178 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 C3orf84H3BNL1 204 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 H7BYZ3 331 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 M0R2Z0 102 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 IQCF2Q8IXL9 164 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 TMEM208Q9BTX3 173 aa12.09□□□□□ -0.47
RNF40-206ENST00000564260 EIF3GO75821 320 aaKnown RBP eCLIP12.08□□□□□ -0.48
RNF40-206ENST00000564260 HBE1P02100 147 aa12.08□□□□□ -0.48
RNF40-206ENST00000564260 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
RNF40-206ENST00000564260 MUC7Q8TAX7 377 aa12.08□□□□□ -0.48
RNF40-206ENST00000564260 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
RNF40-206ENST00000564260 IGKV2-40A0A087WW87 121 aaPredicted RBP12.07□□□□□ -0.48
RNF40-206ENST00000564260 A0A0J9YWU9 116 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 FAM74A7A6NL05 159 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 GGTLC3B5MD39 225 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 IGKV2D-40P01614 121 aaPredicted RBP12.07□□□□□ -0.48
RNF40-206ENST00000564260 TCRAP04437 139 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 FXYD7P58549 80 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 TAS2R60P59551 318 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
RNF40-206ENST00000564260 PMS2P11Q13670 270 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 NIPSNAP3BQ9BS92 247 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
RNF40-206ENST00000564260 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 F6UZH7 168 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 GFI1BQ5VTD9 330 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 ZNF493Q6ZR52 646 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 CYB561D1Q8N8Q1 229 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 VGLL1Q99990 258 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 PYGO2Q9BRQ0 406 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
RNF40-206ENST00000564260 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
RNF40-206ENST00000564260 FGF8P55075 233 aaPredicted RBP12.05□□□□□ -0.48
RNF40-206ENST00000564260 ERCC8Q13216 396 aa12.05□□□□□ -0.48
RNF40-206ENST00000564260 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
RNF40-206ENST00000564260 TMEM75Q8N9X5 138 aa12.05□□□□□ -0.48
RNF40-206ENST00000564260 NDFIP1Q9BT67 221 aa12.05□□□□□ -0.48
RNF40-206ENST00000564260 MANBALQ9NQG1 85 aa12.05□□□□□ -0.48
RNF40-206ENST00000564260 DNAH7Q8WXX0 4024 aa12.05□□□□□ -0.48
RNF40-206ENST00000564260 TRAV12-2A0A075B6T6 113 aa12.04□□□□□ -0.48
RNF40-206ENST00000564260 C7orf71A4D174 169 aa12.04□□□□□ -0.48
RNF40-206ENST00000564260 GPX1P07203 203 aa12.04□□□□□ -0.48
RNF40-206ENST00000564260 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
RNF40-206ENST00000564260 ZFAND2AQ8N6M9 145 aa12.04□□□□□ -0.48
RNF40-206ENST00000564260 TMPRSS5Q9H3S3 457 aa12.04□□□□□ -0.48
RNF40-206ENST00000564260 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
RNF40-206ENST00000564260 IGHV3OR16-12A0A075B7B8 117 aa12.03□□□□□ -0.48
RNF40-206ENST00000564260 IFNA7P01567 189 aa12.03□□□□□ -0.48
RNF40-206ENST00000564260 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
RNF40-206ENST00000564260 C16orf74Q96GX8 76 aa12.03□□□□□ -0.48
RNF40-206ENST00000564260 LINC01587Q99440 93 aa12.03□□□□□ -0.48
RNF40-206ENST00000564260 LOC102723971A0A1B0GUV8 181 aa12.02□□□□□ -0.49
RNF40-206ENST00000564260 ZNF324O75467 553 aaPredicted RBP12.02□□□□□ -0.49
RNF40-206ENST00000564260 RBMY1A1P0DJD3 496 aaKnown RBP12.02□□□□□ -0.49
RNF40-206ENST00000564260 RBMY1CP0DJD4 496 aa12.02□□□□□ -0.49
RNF40-206ENST00000564260 BLOC1S1P78537 153 aa12.02□□□□□ -0.49
RNF40-206ENST00000564260 RBMY1FQ15415 496 aaKnown RBP12.02□□□□□ -0.49
RNF40-206ENST00000564260 C11orf45Q8TAV5 145 aa12.02□□□□□ -0.49
RNF40-206ENST00000564260 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
RNF40-206ENST00000564260 PEX7O00628 323 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 IFNA1P01562 189 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
RNF40-206ENST00000564260 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 UBE2G2P60604 165 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 Q6AWC8 147 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 ZNF680Q8NEM1 530 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 RPH3ALQ9UNE2 315 aa12.01□□□□□ -0.49
RNF40-206ENST00000564260 TRBV6-1A0A0K0K1D8 114 aa12□□□□□ -0.49
RNF40-206ENST00000564260 LYRM9A8MSI8 78 aa12□□□□□ -0.49
RNF40-206ENST00000564260 C11orf94C9JXX5 98 aa12□□□□□ -0.49
RNF40-206ENST00000564260 NKX2-5P52952 324 aaPredicted RBP12□□□□□ -0.49
RNF40-206ENST00000564260 GNG5P63218 68 aa12□□□□□ -0.49
RNF40-206ENST00000564260 FLI1Q01543 452 aaPredicted RBP12□□□□□ -0.49
RNF40-206ENST00000564260 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
RNF40-206ENST00000564260 CST9LP1Q5W188 147 aa12□□□□□ -0.49
RNF40-206ENST00000564260 Q8TAT8 98 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms