RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 BMPR1BO00238 502 aa13.85□□□□□ -0.19
GDE1-203ENST00000564172 NDUFB4O95168 129 aa13.85□□□□□ -0.19
GDE1-203ENST00000564172 HIST1H1EP10412 219 aaKnown RBP13.85□□□□□ -0.19
GDE1-203ENST00000564172 MIC13Q5XKP0 118 aa13.85□□□□□ -0.19
GDE1-203ENST00000564172 NPIPB3Q92617 1050 aa13.85□□□□□ -0.19
GDE1-203ENST00000564172 ZC2HC1AQ96GY0 325 aa13.85□□□□□ -0.19
GDE1-203ENST00000564172 FLNAP21333 2647 aaKnown RBP13.85□□□□□ -0.19
GDE1-203ENST00000564172 A0A087X0K7 114 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 LINC01548A6NM66 108 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 M0R2Z0 102 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 FAM162BQ5T6X4 162 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 TMEM191AQ9H0A3 160 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 TLN2Q9Y4G6 2542 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 IGHV3-21A0A0B4J1V1 117 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 KLF5Q13887 457 aaPredicted RBP13.84□□□□□ -0.19
GDE1-203ENST00000564172 NOTCH2Q04721 2471 aa13.84□□□□□ -0.19
GDE1-203ENST00000564172 I3L2K1 104 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 IGHV4-59P01825 116 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 FABP2P12104 132 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 RPL32P62910 135 aaKnown RBP13.83□□□□□ -0.2
GDE1-203ENST00000564172 SPATA31B1PQ5VZV4 182 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 OR10G9Q8NGN4 311 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 OR10G7Q8NGN6 311 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 GRAMD2BQ96HH9 432 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 PRR20EP86478 221 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 PRR20CP86479 221 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 PRR20DP86480 221 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 PRR20BP86481 221 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 PRR20AP86496 221 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 GCSAMLQ5JQS6 135 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 BPIFA4PQ86YQ2 179 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 STPG3Q8N7X2 389 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 TMEM116Q8NCL8 245 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 OCC1Q8TAD7 63 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 TMUB1Q9BVT8 246 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 SLC25A22Q9H936 323 aa13.83□□□□□ -0.2
GDE1-203ENST00000564172 F8W1H4 67 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 COX8AP10176 69 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 KRTAP1-1Q07627 177 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 THAP8Q8NA92 274 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 SPANXB1Q9NS25 103 aaPredicted RBP13.82□□□□□ -0.2
GDE1-203ENST00000564172 SIGLEC8Q9NYZ4 499 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 IGLV11-55A0A075B6I3 123 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 K7EIM0 57 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 C2orf91Q6ZV80 131 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 RNF183Q96D59 192 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 YAE1D1Q9NRH1 226 aa13.82□□□□□ -0.2
GDE1-203ENST00000564172 TRBV20OR9-2A0A075B6H5 130 aa13.81□□□□□ -0.2
GDE1-203ENST00000564172 IGKV1D-37A0A075B6S9 117 aa13.81□□□□□ -0.2
GDE1-203ENST00000564172 RASL11AQ6T310 242 aa13.81□□□□□ -0.2
GDE1-203ENST00000564172 AKAP9Q99996 3911 aa13.81□□□□□ -0.2
GDE1-203ENST00000564172 Q6YL49 198 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 ACANP16112 2415 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 C9JCJ5 164 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 G3V318 75 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 ISLRO14498 428 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 SIVA1O15304 175 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 BLCAPP62952 87 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 ADAMTSL5Q6ZMM2 481 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 FAM110DQ8TAY7 271 aaPredicted RBP13.8□□□□□ -0.2
GDE1-203ENST00000564172 SPANXA1Q9NS26 97 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 TP73-AS1Q9UF72 201 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 HSPB8Q9UJY1 196 aa13.8□□□□□ -0.2
GDE1-203ENST00000564172 MYO9AB2RTY4 2548 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 APCSP02743 223 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 PF4V1P10720 104 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 TEX29Q8N6K0 151 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 V9GYV3 84 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 hDV102S1A0JD36 115 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 IGHG2P01859 326 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 FRMD6-AS1P0C7T7 363 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 KIR3DS1Q14943 382 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 C8orf86Q6ZUL3 223 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 IL17RELQ6ZVW7 336 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 TNFRSF19Q9NS68 423 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
GDE1-203ENST00000564172 PGPEP1LA6NFU8 196 aa13.78□□□□□ -0.2
GDE1-203ENST00000564172 HMGB3O15347 200 aaKnown RBP13.78□□□□□ -0.2
GDE1-203ENST00000564172 CRIP2P52943 208 aaPredicted RBP13.78□□□□□ -0.2
GDE1-203ENST00000564172 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
GDE1-203ENST00000564172 SERTAD4Q9NUC0 356 aa13.78□□□□□ -0.2
GDE1-203ENST00000564172 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
GDE1-203ENST00000564172 Q6ZS46 218 aa13.78□□□□□ -0.2
GDE1-203ENST00000564172 TRGV9Q99603 122 aa13.78□□□□□ -0.2
GDE1-203ENST00000564172 CITED2Q99967 270 aaPredicted RBP13.78□□□□□ -0.2
GDE1-203ENST00000564172 OR2J3O76001 311 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 IGF1P05019 195 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 KLK9Q2XQG4 91 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 BOD1L2Q8IYS8 172 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 WIPF2Q8TF74 440 aaPredicted RBP13.77□□□□□ -0.21
GDE1-203ENST00000564172 VGLL1Q99990 258 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 C19orf24Q9BVV8 132 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms