RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 B5MCH6 92 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 H3BRN7 92 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 SEC11AP67812 179 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 ABHD17AQ96GS6 310 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 DKK2Q9UBU2 259 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 Q6AWC8 147 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 PVRIGQ6DKI7 326 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 C2orf91Q6ZV80 131 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 TTTY13Q9BZ97 58 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 TACC2O95359 2948 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 J3KRW8 73 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 ANXA2RQ3ZCQ2 193 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.3□□□□□ -0.92
ABCA3-203ENST00000563623 NBR2O15453 112 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 C1orf122Q6ZSJ8 110 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 MTURNQ8N3F0 131 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
ABCA3-203ENST00000563623 SMAD7O15105 426 aaKnown RBP9.29□□□□□ -0.92
ABCA3-203ENST00000563623 IGLV1-47P01700 117 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 PRR30Q53SZ7 412 aaPredicted RBP9.29□□□□□ -0.92
ABCA3-203ENST00000563623 PIP4P1Q86T03 277 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 SCGB1A1P11684 91 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 LEPP41159 167 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 ADAMTSL5Q6ZMM2 481 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 MAP1LC3AQ9H492 121 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 C21orf62Q9NYP8 219 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 CEACAM4O75871 244 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 VGLL1Q99990 258 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 NPFFR1Q9GZQ6 430 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 HIF1ANQ9NWT6 349 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 DPM3Q9P2X0 92 aa9.29□□□□□ -0.92
ABCA3-203ENST00000563623 ATRXP46100 2492 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 CRYGBP07316 175 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
ABCA3-203ENST00000563623 C8orf31Q8N9H6 132 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 ANAPC13Q9BS18 74 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 K7EMI3 77 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 K7EP34 96 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 RPL7P18124 248 aaKnown RBP9.28□□□□□ -0.92
ABCA3-203ENST00000563623 ERCC8Q13216 396 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 FOXC2Q99958 501 aa9.28□□□□□ -0.92
ABCA3-203ENST00000563623 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
ABCA3-203ENST00000563623 ATP5G2Q06055 141 aa9.27□□□□□ -0.92
ABCA3-203ENST00000563623 IGFL3Q6UXB1 125 aa9.27□□□□□ -0.92
ABCA3-203ENST00000563623 RAB1BQ9H0U4 201 aa9.27□□□□□ -0.92
ABCA3-203ENST00000563623 KAAG1Q9UBP8 84 aa9.27□□□□□ -0.92
ABCA3-203ENST00000563623 GATA1P15976 413 aaPredicted RBP9.27□□□□□ -0.93
ABCA3-203ENST00000563623 ECSCRQ19T08 205 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 CCDC144NLQ6NUI1 221 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 GTSCR1Q86UQ5 136 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 TMEM160Q9NX00 188 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 SHISA9B4DS77 424 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 NDUFS7O75251 213 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 LYPD1Q8N2G4 141 aa9.27□□□□□ -0.93
ABCA3-203ENST00000563623 B9A039 149 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 ETDBQ3ZM63 59 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 PRR25Q96S07 402 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 SPINK8P0C7L1 97 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 LGALS9BQ3B8N2 356 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 JMJD8Q96S16 334 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 A0A096LNJ9 63 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 KALRNO60229 2985 aa9.26□□□□□ -0.93
ABCA3-203ENST00000563623 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
ABCA3-203ENST00000563623 ZNF672Q499Z4 452 aaPredicted RBP9.25□□□□□ -0.93
ABCA3-203ENST00000563623 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 PIEZO1Q92508 2521 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 H3BRM9 83 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 SMIM13P0DJ93 91 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 GATA3P23771 443 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 RNF183Q96D59 192 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 TIMD4Q96H15 378 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 NHP2Q9NX24 153 aaKnown RBP9.25□□□□□ -0.93
ABCA3-203ENST00000563623 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
ABCA3-203ENST00000563623 K7ERJ3 54 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 SIVA1O15304 175 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 OR4X2Q8NGF9 303 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 OR9G4Q8NGQ1 327 aa9.25□□□□□ -0.93
ABCA3-203ENST00000563623 SMG1Q96Q15 3661 aaKnown RBP9.24□□□□□ -0.93
ABCA3-203ENST00000563623 TNFRSF13BO14836 293 aaPredicted RBP9.24□□□□□ -0.93
ABCA3-203ENST00000563623 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
ABCA3-203ENST00000563623 ODF1Q14990 250 aa9.24□□□□□ -0.93
ABCA3-203ENST00000563623 SAMD5Q5TGI4 173 aa9.24□□□□□ -0.93
ABCA3-203ENST00000563623 TRBV7-9A0A0J9YWB2 115 aa9.24□□□□□ -0.93
ABCA3-203ENST00000563623 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
ABCA3-203ENST00000563623 TMEM158Q8WZ71 300 aa9.24□□□□□ -0.93
ABCA3-203ENST00000563623 SMIM17P0DL12 118 aa9.23□□□□□ -0.93
ABCA3-203ENST00000563623 ZC2HC1BQ5TFG8 222 aa9.23□□□□□ -0.93
ABCA3-203ENST00000563623 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms