RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LINC01619G3V211 115 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 K7EQM0 130 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 HAX1O00165 279 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 OR1N2Q8NGR9 330 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 OSTCQ9NRP0 149 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 V9GYV3 84 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 CRLF1O75462 422 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 SMIM12Q96EX1 92 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 HIST1H2BLQ99880 126 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 NSD1Q96L73 2696 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-208ENST00000563220 TRAV9-1A0A075B6T8 112 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 SERTM2A0A1B0GWG4 89 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 SOCS3O14543 225 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 TCF21O43680 179 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
COMMD4-208ENST00000563220 PRR27Q6MZM9 219 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 LINC00322Q6ZN03 302 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-208ENST00000563220 WFDC12Q8WWY7 111 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 VGLL1Q99990 258 aa13.67□□□□□ -0.22
COMMD4-208ENST00000563220 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
COMMD4-208ENST00000563220 FABP4P15090 132 aa13.66□□□□□ -0.22
COMMD4-208ENST00000563220 IBA57Q5T440 356 aaKnown RBP13.66□□□□□ -0.22
COMMD4-208ENST00000563220 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
COMMD4-208ENST00000563220 DPF1Q92782 380 aa13.66□□□□□ -0.22
COMMD4-208ENST00000563220 C20orf173Q96LM9 149 aa13.66□□□□□ -0.22
COMMD4-208ENST00000563220 CITED2Q99967 270 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-208ENST00000563220 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
COMMD4-208ENST00000563220 NUDT10Q8NFP7 164 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 NUDT11Q96G61 164 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 PACRGQ96M98 296 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-208ENST00000563220 NRN1Q9NPD7 142 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 C2orf70A6NJV1 201 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 CBLN1P23435 193 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 PDZD11Q5EBL8 140 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 ADAMTSL5Q6ZMM2 481 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 FAM231DQ6ZW35 169 aa13.65□□□□□ -0.22
COMMD4-208ENST00000563220 A0A1W2PRX2 142 aa13.64□□□□□ -0.23
COMMD4-208ENST00000563220 XKRY2A2RUG3 117 aa13.64□□□□□ -0.23
COMMD4-208ENST00000563220 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
COMMD4-208ENST00000563220 PROK1P58294 105 aa13.64□□□□□ -0.23
COMMD4-208ENST00000563220 ERCC8Q13216 396 aa13.64□□□□□ -0.23
COMMD4-208ENST00000563220 MRPL53Q96EL3 112 aaKnown RBP13.64□□□□□ -0.23
COMMD4-208ENST00000563220 BAHCC1Q9P281 2608 aa13.64□□□□□ -0.23
COMMD4-208ENST00000563220 DLX4Q92988 240 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-208ENST00000563220 RAX2Q96IS3 184 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 IL36BQ9NZH7 164 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 AMBPP02760 352 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 BMI1P35226 326 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 ZC2HC1AQ96GY0 325 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 C8orf49Q96NF6 230 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 CLEC5AQ9NY25 188 aa13.63□□□□□ -0.23
COMMD4-208ENST00000563220 TSSC4Q9Y5U2 329 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-208ENST00000563220 SETD2Q9BYW2 2564 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-208ENST00000563220 C19orf71A6NCJ1 209 aa13.62□□□□□ -0.23
COMMD4-208ENST00000563220 ZNF705GA8MUZ8 300 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-208ENST00000563220 CA1P00915 261 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-208ENST00000563220 Q8TAT8 98 aa13.62□□□□□ -0.23
COMMD4-208ENST00000563220 RBAKDNA6NC62 111 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 GATCO43716 136 aaKnown RBP13.61□□□□□ -0.23
COMMD4-208ENST00000563220 PRR25Q96S07 402 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 ZNF492Q9P255 531 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 CRIP1P50238 77 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 JOSD1Q15040 202 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-208ENST00000563220 OR9G4Q8NGQ1 327 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 DCANP1Q8TF63 244 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 AGPAT4-IT1Q9H0P7 198 aa13.61□□□□□ -0.23
COMMD4-208ENST00000563220 FBLL1A6NHQ2 334 aaKnown RBP13.6□□□□□ -0.23
COMMD4-208ENST00000563220 CDPF1Q6NVV7 123 aa13.6□□□□□ -0.23
COMMD4-208ENST00000563220 WFDC3Q8IUB2 231 aa13.6□□□□□ -0.23
COMMD4-208ENST00000563220 TRAPPC1Q9Y5R8 145 aa13.6□□□□□ -0.23
COMMD4-208ENST00000563220 SETXQ7Z333 2677 aaKnown RBP13.6□□□□□ -0.23
COMMD4-208ENST00000563220 F8P00451 2351 aa13.6□□□□□ -0.23
COMMD4-208ENST00000563220 CCL24O00175 119 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 DEFB1P60022 68 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 KRTAP10-3P60369 221 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 FHL3Q13643 280 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 ZNF738Q8NE65 137 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 ZNF705DP0CH99 300 aaPredicted RBP13.59□□□□□ -0.23
COMMD4-208ENST00000563220 ZNF705BP0CI00 300 aaPredicted RBP13.59□□□□□ -0.23
COMMD4-208ENST00000563220 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 COX8CQ7Z4L0 72 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 DAZAP1Q96EP5 407 aaKnown RBP13.59□□□□□ -0.23
COMMD4-208ENST00000563220 PEMTQ9UBM1 199 aa13.59□□□□□ -0.23
COMMD4-208ENST00000563220 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.24
COMMD4-208ENST00000563220 CSN3P07498 182 aa13.58□□□□□ -0.24
COMMD4-208ENST00000563220 ADARB2-AS1A8MUL3 147 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 M0QZ24 198 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 P01737 135 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 TFPI2P48307 235 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 TCL1AP56279 114 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 C9orf47Q6ZRZ4 202 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 TMEM18Q96B42 140 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 NPIPB6E9PJ23 425 aa13.57□□□□□ -0.24
COMMD4-208ENST00000563220 RPP21Q9H633 154 aaKnown RBP13.57□□□□□ -0.24
COMMD4-208ENST00000563220 PKIAP61925 76 aa13.56□□□□□ -0.24
COMMD4-208ENST00000563220 F6UB75 175 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms