RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 EIF3GO75821 320 aaKnown RBP eCLIP4.47□□□□□ -1.69
CNOT1-204ENST00000563130 MBP02144 154 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 HIST1H1AQ02539 215 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-204ENST00000563130 C1orf158Q8N1D5 194 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 LYPD1Q8N2G4 141 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 EXOC3-AS1Q8N2X6 119 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 BLNKQ8WV28 456 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 PHYHIPLQ96FC7 376 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 FAM210AQ96ND0 272 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 NEU1Q99519 415 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 PRELID1Q9Y255 219 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 A0A1W2PPV4 95 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 PRB4P10163 310 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-204ENST00000563130 MIFP14174 115 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 CDC34P49427 236 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-204ENST00000563130 FXYD7P58549 80 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 UBE2L3P68036 154 aaKnown RBP4.47□□□□□ -1.69
CNOT1-204ENST00000563130 FAM122CQ6P4D5 195 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 SUN5Q8TC36 379 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 IGF2BP2-AS1Q96M15 143 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 PPP1R14DQ9NXH3 145 aa4.47□□□□□ -1.69
CNOT1-204ENST00000563130 KMT2CQ8NEZ4 4911 aaKnown RBP4.46□□□□□ -1.69
CNOT1-204ENST00000563130 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 M0R2Z0 102 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 AMBPP02760 352 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 RBMY1A1P0DJD3 496 aaKnown RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 RBMY1CP0DJD4 496 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 ICAM4Q14773 271 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 RBMY1FQ15415 496 aaKnown RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF726P1Q15940 193 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 SPINK13Q1W4C9 94 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 CASC10Q5T4H9 136 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 SSX7Q7RTT5 188 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 IL17DQ8TAD2 202 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 ODF3Q96PU9 254 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 AAMDCQ9H7C9 122 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 HMGB3O15347 200 aaKnown RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 BCL2L11O43521 198 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 C1QBP02746 253 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 ARL14EPLP0DKL9 152 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 CDKN1BP46527 198 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 RANP62826 216 aaKnown RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 LGALSLQ3ZCW2 172 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 CST9LP1Q5W188 147 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 C9orf47Q6ZRZ4 202 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 OR10J6PQ8NGY7 276 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 FAM19A4Q96LR4 140 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 ACTR3CQ9C0K3 210 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-204ENST00000563130 Q9H3A6 140 aa4.46□□□□□ -1.7
CNOT1-204ENST00000563130 LOC102723971A0A1B0GUV8 181 aa4.45□□□□□ -1.7
CNOT1-204ENST00000563130 SEC11BP0C7V7 166 aa4.45□□□□□ -1.7
CNOT1-204ENST00000563130 CT45A10P0DMU9 189 aa4.45□□□□□ -1.7
CNOT1-204ENST00000563130 TMUB2Q71RG4 321 aa4.45□□□□□ -1.7
CNOT1-204ENST00000563130 BAP18Q8IXM2 172 aa4.45□□□□□ -1.7
CNOT1-204ENST00000563130 AGPAT4-IT1Q9H0P7 198 aa4.45□□□□□ -1.7
CNOT1-204ENST00000563130 TRAV12-2A0A075B6T6 113 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 CTXND1A0A1B0GTU2 59 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 A0A1B0GVG6 124 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 RBAKDNA6NC62 111 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 KLLNB2CW77 178 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 DEFB4AO15263 64 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 CXorf1O96002 111 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 INSP01308 110 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 SLC25A5P05141 298 aaKnown RBP4.44□□□□□ -1.7
CNOT1-204ENST00000563130 GCHFRP30047 84 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 CD300CQ08708 224 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 AKAP14Q86UN6 197 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 STOML3Q8TAV4 291 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 HYLS1Q96M11 299 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 LINC00477Q96M19 166 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF471Q9BX82 626 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-204ENST00000563130 OTORQ9NRC9 128 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 GOLT1BQ9Y3E0 138 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 TRBV7-9A0A0J9YWB2 115 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 GAGE10A6NGK3 116 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 DIRC3C9JPN6 131 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 NMBP08949 121 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 CRISP2P16562 243 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 TSPOP30536 169 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 ERCC8Q13216 396 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 AKR1C8PQ5T2L2 129 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 TMEM256Q8N2U0 113 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 RXFP4Q8TDU9 374 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 VGLL1Q99990 258 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 C20orf144Q9BQM9 153 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 TMEM167BQ9NRX6 74 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF492Q9P255 531 aa4.44□□□□□ -1.7
CNOT1-204ENST00000563130 IGHV3OR16-12A0A075B7B8 117 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 IGKV2-40A0A087WW87 121 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-204ENST00000563130 PGPA6NDG6 321 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 UMAD1C9J7I0 102 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 IGKV2D-40P01614 121 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-204ENST00000563130 CSN1S1P47710 185 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 FHITP49789 147 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 EIF5AP63241 154 aaKnown RBP4.43□□□□□ -1.7
CNOT1-204ENST00000563130 GFI1BQ5VTD9 330 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms