RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 RITA1Q96K30 269 aa10.76□□□□□ -0.69
AC040174.1-201ENST00000563003 GEMIN7Q9H840 131 aaKnown RBP10.76□□□□□ -0.69
AC040174.1-201ENST00000563003 CCL21O00585 134 aa10.75□□□□□ -0.69
AC040174.1-201ENST00000563003 FBXL19-AS1Q494R0 122 aa10.75□□□□□ -0.69
AC040174.1-201ENST00000563003 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
AC040174.1-201ENST00000563003 C8orf49Q96NF6 230 aa10.75□□□□□ -0.69
AC040174.1-201ENST00000563003 TMEM30BQ3MIR4 351 aa10.75□□□□□ -0.69
AC040174.1-201ENST00000563003 PRO0461Q9UI25 63 aa10.75□□□□□ -0.69
AC040174.1-201ENST00000563003 NPIPB5A8MRT5 1133 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 CCL8P80075 99 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 PSMG4Q5JS54 123 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 SHISA9B4DS77 424 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 IGKCP01834 107 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 PRSS1P07477 247 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 MRGPRG-AS1Q2M3A8 158 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 C12orf74Q32Q52 190 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 TEX36Q5VZQ5 186 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 PVRIGQ6DKI7 326 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 C20orf78Q9BR46 151 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 CFAP46Q8IYW2 2715 aa10.74□□□□□ -0.69
AC040174.1-201ENST00000563003 EVI2AP22794 236 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 ZNF48Q96MX3 618 aaPredicted RBP10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 CCL3L1P16619 93 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 MC5RP33032 325 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 SIGLEC15Q6ZMC9 328 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 TMEM133Q9H2Q1 129 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 MRPL16Q9NX20 251 aaKnown RBP10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 FAM208BQ5VWN6 2430 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 ADGRG4Q8IZF6 3080 aa10.73□□□□□ -0.69
AC040174.1-201ENST00000563003 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 E7EQL1 145 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 M0R3E3 92 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 LEPP41159 167 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 VMA21Q3ZAQ7 101 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 PRORYQ9H606 182 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 LINC00312Q9Y6C7 94 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 CD3EP07766 207 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 KLF17Q5JT82 389 aaPredicted RBP10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 TWIST1Q15672 202 aa10.72□□□□□ -0.69
AC040174.1-201ENST00000563003 PKDREJQ9NTG1 2253 aa10.71□□□□□ -0.69
AC040174.1-201ENST00000563003 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.71□□□□□ -0.69
AC040174.1-201ENST00000563003 FOXC2Q99958 501 aa10.71□□□□□ -0.69
AC040174.1-201ENST00000563003 SH2D1AO60880 128 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 GAS8-AS1O95177 125 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 FCER1GP30273 86 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 ADORA2A-AS1P86434 159 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 RRN3P1Q2M238 152 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 LINC01560Q8TB33 94 aa10.71□□□□□ -0.7
AC040174.1-201ENST00000563003 AGRNO00468 2067 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 DPM2O94777 84 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 APOMO95445 188 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 C8orf86Q6ZUL3 223 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 MAP1LC3AQ9H492 121 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 NBASA2RRP1 2371 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 IGHV3-72A0A0B4J1Y9 119 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 B9A039 149 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 ENSAO43768 121 aaKnown RBP10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 RPL27AP46776 148 aaKnown RBP10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 SYT8Q8NBV8 401 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 TMEM160Q9NX00 188 aa10.7□□□□□ -0.7
AC040174.1-201ENST00000563003 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 TMEM178BH3BS89 294 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 RBP4P02753 201 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 FOXI1Q12951 378 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 TAL2Q16559 108 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 LINC01546A6NGU7 62 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 SPINK8P0C7L1 97 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 HLA-DRB4P13762 266 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 LYPD1Q8N2G4 141 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 RNF185Q96GF1 192 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 RASL11BQ9BPW5 248 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 SHANK2-AS3Q9BTD1 123 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 HLA-DRB4X5D2U9 266 aa10.69□□□□□ -0.7
AC040174.1-201ENST00000563003 GRNP28799 593 aaKnown RBP10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 LY6DQ14210 128 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 TMEM200BQ69YZ2 307 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 CCL17Q92583 94 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 ANKHD1Q8IWZ3 2542 aaKnown RBP10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 IGKV1-17P01599 117 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 CYSLTR1Q9Y271 337 aa10.68□□□□□ -0.7
AC040174.1-201ENST00000563003 ATP5LO75964 103 aa10.67□□□□□ -0.7
AC040174.1-201ENST00000563003 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
AC040174.1-201ENST00000563003 EGR2P11161 476 aaPredicted RBP10.67□□□□□ -0.7
AC040174.1-201ENST00000563003 CNTFRP26992 372 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms