RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 FHL5Q5TD97 284 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 MDP1Q86V88 176 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 VKORC1L1Q8N0U8 176 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 CD177Q8N6Q3 437 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 LINC01465Q8N7H1 131 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 C11orf44Q8N8P7 122 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 SMCR5Q8TEV8 140 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 RNASE6Q93091 150 aaKnown RBP3.81□□□□□ -1.8
TCF4-215ENST00000562638 ZNF355PQ9NSJ1 428 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 HEATR5BQ9P2D3 2071 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 A0A087WWL8 130 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 PRSS38A1L453 326 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 KNCNA6PVL3 124 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 PAX4O43316 350 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 DEFA4P12838 97 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 ZNF22P17026 224 aaPredicted RBP3.8□□□□□ -1.8
TCF4-215ENST00000562638 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
TCF4-215ENST00000562638 FHL2Q14192 279 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 TWIST1Q15672 202 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 KISS1Q15726 138 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 TM2D3Q9BRN9 247 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 PAXXQ9BUH6 204 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 FOXQ1Q9C009 403 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 RPP21Q9H633 154 aaKnown RBP3.8□□□□□ -1.8
TCF4-215ENST00000562638 LSM4Q9Y4Z0 139 aaKnown RBP3.8□□□□□ -1.8
TCF4-215ENST00000562638 ARHGEF17Q96PE2 2063 aaPredicted RBP3.8□□□□□ -1.8
TCF4-215ENST00000562638 RALGAPA1Q6GYQ0 2036 aa3.8□□□□□ -1.8
TCF4-215ENST00000562638 AGRNO00468 2067 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 IGKV1D-13A0A0B4J2D9 117 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 H3BTX0 84 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 SPRY3O43610 288 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 BCE1O60756 84 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 IGHV3-33P01772 117 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 CFC1P0CG37 223 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 IGKV1-13P0DP09 117 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 MAGEA5P43359 124 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 SYNJ2BPP57105 145 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 RPS18P62269 152 aaKnown RBP3.79□□□□□ -1.8
TCF4-215ENST00000562638 DAND5Q8N907 189 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 PRSS3P2Q8NHM4 247 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 DEPPQ9NTK1 212 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 RBM12B-AS1Q9P1G2 102 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 LTBP2Q14767 1821 aa3.79□□□□□ -1.8
TCF4-215ENST00000562638 IGHV1-58A0A0C4DH39 117 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 TRBV30A0A0K0K1B3 111 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 A0A1W2PP55 124 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 IBA57-AS1B1ANH7 110 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 H7BZZ5 65 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 H7C423 109 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 COX6B1P14854 86 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 PLNP26678 52 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 SAA4P35542 130 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 IFI27P40305 119 aaPredicted RBP3.78□□□□□ -1.8
TCF4-215ENST00000562638 APOC4P55056 127 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 BEAN1Q3B7T3 259 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 PVRIGQ6DKI7 326 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 GFRALQ6UXV0 394 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 FOXL2NBQ6ZUU3 175 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 LINC00305Q7Z4B0 112 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 Q8N2B8 174 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 DCANP1Q8TF63 244 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 SSMEM1Q8WWF3 244 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 SPACA5Q96QH8 159 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 NABP2Q9BQ15 211 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 PROK2Q9HC23 129 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 DYNLRB1Q9NP97 96 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 ZNF71Q9NQZ8 489 aaPredicted RBP3.78□□□□□ -1.8
TCF4-215ENST00000562638 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
TCF4-215ENST00000562638 TIMM13Q9Y5L4 95 aaPredicted RBP3.78□□□□□ -1.8
TCF4-215ENST00000562638 COL4A6Q14031 1691 aa3.78□□□□□ -1.81
TCF4-215ENST00000562638 TRBV6-6A0A0A6YYG2 114 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 IGHV3-30P01768 117 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 IGHV3-30-5P0DP03 117 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 VPREB1P12018 145 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 CD24P25063 80 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 FCER1GP30273 86 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 EDDM3BP56851 147 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 PCBD1P61457 104 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 ORMDL2Q53FV1 153 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 Q6JHZ5 121 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 LYPD5Q6UWN5 251 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 C2orf82Q6UX34 121 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 ZNF714Q96N38 554 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 TMEM243Q9BU79 118 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 CCL28Q9NRJ3 127 aa3.77□□□□□ -1.81
TCF4-215ENST00000562638 PHPT1Q9NRX4 125 aaPredicted RBP3.77□□□□□ -1.81
TCF4-215ENST00000562638 C2orf16Q68DN1 1984 aa3.76□□□□□ -1.81
TCF4-215ENST00000562638 SHANK1Q9Y566 2161 aa3.76□□□□□ -1.81
TCF4-215ENST00000562638 TRAV12-1A0A0B4J245 112 aa3.76□□□□□ -1.81
TCF4-215ENST00000562638 TRBV6-1A0A0K0K1D8 114 aa3.76□□□□□ -1.81
TCF4-215ENST00000562638 A0A1W2PQD3 144 aa3.76□□□□□ -1.81
TCF4-215ENST00000562638 DDTLA6NHG4 134 aaPredicted RBP3.76□□□□□ -1.81
TCF4-215ENST00000562638 M0R135 149 aa3.76□□□□□ -1.81
TCF4-215ENST00000562638 EIF4EBP3O60516 100 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms