RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 CD28P10747 220 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 SLURP1P55000 103 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 PROK1P58294 105 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 FHL3Q13643 280 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 KLHL30-AS1Q8NEE0 82 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 DCANP1Q8TF63 244 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 DPF1Q92782 380 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 C8orf49Q96NF6 230 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 GFRA4Q9GZZ7 299 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 AGPAT4-IT1Q9H0P7 198 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 LENEPQ9Y5L5 61 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 TSSC4Q9Y5U2 329 aaPredicted RBP7.19□□□□□ -1.26
CDH13-205ENST00000562307 HIVEP2P31629 2446 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 HIVEP1P15822 2718 aa7.19□□□□□ -1.26
CDH13-205ENST00000562307 TCF21O43680 179 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 TRGC2P03986 189 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 ID1P41134 155 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 ZNF138P52744 262 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 FOXA3P55318 350 aaPredicted RBP7.18□□□□□ -1.26
CDH13-205ENST00000562307 RPL11P62913 178 aaKnown RBP7.18□□□□□ -1.26
CDH13-205ENST00000562307 RPL19P84098 196 aaKnown RBP7.18□□□□□ -1.26
CDH13-205ENST00000562307 SRSF2Q01130 221 aaKnown RBP7.18□□□□□ -1.26
CDH13-205ENST00000562307 ERCC8Q13216 396 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 DEFB136Q30KP8 78 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 COX19Q49B96 90 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 DLX4Q92988 240 aaPredicted RBP7.18□□□□□ -1.26
CDH13-205ENST00000562307 LINC00477Q96M19 166 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 NDFIP1Q9BT67 221 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 PEMTQ9UBM1 199 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 RNF114Q9Y508 228 aa7.18□□□□□ -1.26
CDH13-205ENST00000562307 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 TRBV7-9A0A0J9YWB2 115 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 K7EQG2 157 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 M0QZ24 198 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 CA1P00915 261 aaPredicted RBP7.17□□□□□ -1.26
CDH13-205ENST00000562307 CSN3P07498 182 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 CT45A10P0DMU9 189 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 PRB4P10163 310 aaPredicted RBP7.17□□□□□ -1.26
CDH13-205ENST00000562307 SMUG1Q53HV7 270 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 KHDC1LQ5JSQ8 128 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 ACTL10Q5JWF8 245 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 FAM162BQ5T6X4 162 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 ZNF738Q8NE65 137 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 NUP35Q8NFH5 326 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 OR9G4Q8NGQ1 327 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 Q8TAT8 98 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 NEU1Q99519 415 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 ASCL2Q99929 193 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 CITED2Q99967 270 aaPredicted RBP7.17□□□□□ -1.26
CDH13-205ENST00000562307 GPR61Q9BZJ8 451 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 MS4A6AQ9H2W1 248 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 NAT8BQ9UHF3 227 aa7.17□□□□□ -1.26
CDH13-205ENST00000562307 FABP5P3A8MUU1 101 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 CCL24O00175 119 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 SH2D1AO60880 128 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
CDH13-205ENST00000562307 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 OR2D3Q8NGH3 330 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 GTSF1Q8WW33 167 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 FRZBQ92765 325 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 FAM19A4Q96LR4 140 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 GNB1LQ9BYB4 327 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 SAV1Q9H4B6 383 aaPredicted RBP7.16□□□□□ -1.26
CDH13-205ENST00000562307 SIGLEC8Q9NYZ4 499 aa7.16□□□□□ -1.26
CDH13-205ENST00000562307 MTORP42345 2549 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 A0A1B0GUS0 222 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIGD1CA8MV81 97 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BKO60814 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BJP06899 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 FRMD6-AS1P0C7T7 363 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BOP23527 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BBP33778 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 TCL1AP56279 114 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BDP58876 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BCP62807 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST2H2BEQ16778 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.15□□□□□ -1.26
CDH13-205ENST00000562307 WDR73Q6P4I2 378 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 RBPMS2Q6ZRY4 209 aaKnown RBP7.15□□□□□ -1.26
CDH13-205ENST00000562307 ATP5L2Q7Z4Y8 100 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 ZNF575Q86XF7 245 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 APRG1Q8IVJ8 170 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 OR8A1Q8NGG7 326 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 OR10J6PQ8NGY7 276 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BHQ93079 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 DUX3Q96PT4 197 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BNQ99877 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 HIST1H2BMQ99879 126 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.26
CDH13-205ENST00000562307 NSD1Q96L73 2696 aaPredicted RBP7.14□□□□□ -1.27
CDH13-205ENST00000562307 IGKV3-7A0A075B6H7 116 aa7.14□□□□□ -1.27
CDH13-205ENST00000562307 A0A1B0GXF2 115 aa7.14□□□□□ -1.27
CDH13-205ENST00000562307 TMEM189A5PLL7 270 aa7.14□□□□□ -1.27
CDH13-205ENST00000562307 HAX1O00165 279 aa7.14□□□□□ -1.27
CDH13-205ENST00000562307 MT-ND6P03923 174 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms