RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PLECQ15149 4684 aaKnown RBP9.7□□□□□ -0.86
CDH1-204ENST00000562118 IGKV2-40A0A087WW87 121 aaPredicted RBP9.69□□□□□ -0.86
CDH1-204ENST00000562118 TRAV1-1A0A0B4J248 108 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 MAP1LC3B2A6NCE7 125 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 M0R2Z0 102 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 IGKV2D-40P01614 121 aaPredicted RBP9.69□□□□□ -0.86
CDH1-204ENST00000562118 SULT1A2P50226 295 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 EIF5AL1Q6IS14 154 aaKnown RBP9.69□□□□□ -0.86
CDH1-204ENST00000562118 VGLL1Q99990 258 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 MAP1LC3BQ9GZQ8 125 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 LENEPQ9Y5L5 61 aa9.69□□□□□ -0.86
CDH1-204ENST00000562118 SERTM2A0A1B0GWG4 89 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 PGPA6NDG6 321 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 INSP01308 110 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 PRB4P10163 310 aaPredicted RBP9.68□□□□□ -0.86
CDH1-204ENST00000562118 FXYD7P58549 80 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 TMEM256Q8N2U0 113 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 ZFAND2AQ8N6M9 145 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
CDH1-204ENST00000562118 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 A0A0J9YWU9 116 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 FAM74A7A6NL05 159 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 TSPOP30536 169 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 CSN1S1P47710 185 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 ERCC8Q13216 396 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 KIR3DS1Q14943 382 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 FAM74A1Q5RGS3 127 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
CDH1-204ENST00000562118 TMPRSS5Q9H3S3 457 aa9.67□□□□□ -0.86
CDH1-204ENST00000562118 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
CDH1-204ENST00000562118 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
CDH1-204ENST00000562118 LEPP41159 167 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 ZNF138P52744 262 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 FGF8P55075 233 aaPredicted RBP9.66□□□□□ -0.86
CDH1-204ENST00000562118 PMS2P11Q13670 270 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 FAM213BQ8TBF2 198 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 LINC00467Q9BRT7 94 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 TCEAL7Q9BRU2 100 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
CDH1-204ENST00000562118 TRAV12-2A0A075B6T6 113 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 ZNF324O75467 553 aaPredicted RBP9.65□□□□□ -0.86
CDH1-204ENST00000562118 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 TCRAP04437 139 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 NKX2-5P52952 324 aaPredicted RBP9.65□□□□□ -0.86
CDH1-204ENST00000562118 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 IL17DQ8TAD2 202 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 MUC7Q8TAX7 377 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
CDH1-204ENST00000562118 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 C3orf84H3BNL1 204 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 H2AFB1P0C5Y9 115 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 GNG5P63218 68 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 PRR9Q5T870 116 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 ATG101Q9BSB4 218 aa9.64□□□□□ -0.87
CDH1-204ENST00000562118 C7orf71A4D174 169 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 TMEM189A5PLL7 270 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 FBLL1A6NHQ2 334 aaKnown RBP9.63□□□□□ -0.87
CDH1-204ENST00000562118 H7BYZ3 331 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 TAS2R60P59551 318 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 SUMO1P63165 101 aaKnown RBP9.63□□□□□ -0.87
CDH1-204ENST00000562118 Q6AWC8 147 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 LYPD6BQ8NI32 183 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 Q8TAT8 98 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 TVP23CQ96ET8 276 aa9.63□□□□□ -0.87
CDH1-204ENST00000562118 PPT1P50897 306 aa9.62□□□□□ -0.87
CDH1-204ENST00000562118 COX8CQ7Z4L0 72 aa9.62□□□□□ -0.87
CDH1-204ENST00000562118 RNASE8Q8TDE3 154 aaKnown RBP9.62□□□□□ -0.87
CDH1-204ENST00000562118 HIST1H2BAQ96A08 127 aa9.62□□□□□ -0.87
CDH1-204ENST00000562118 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
CDH1-204ENST00000562118 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
CDH1-204ENST00000562118 DNAH1Q9P2D7 4330 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 TRBV6-1A0A0K0K1D8 114 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 HBE1P02100 147 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 BTN1A1Q13410 526 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 RRN3P1Q2M238 152 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
CDH1-204ENST00000562118 SACSQ9NZJ4 4579 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 PEX7O00628 323 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 UBE2G2P60604 165 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 CCL20P78556 96 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 ANXA2RQ3ZCQ2 193 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 ZNF493Q6ZR52 646 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
CDH1-204ENST00000562118 MANBALQ9NQG1 85 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 CELA1Q9UNI1 258 aa9.6□□□□□ -0.87
CDH1-204ENST00000562118 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 TEX48A0A1B0GUV7 120 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms