RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
ETFA-218ENST00000560899 DKK2Q9UBU2 259 aa12.35□□□□□ -0.43
ETFA-218ENST00000560899 H7BYZ3 331 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 NMBP08949 121 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 SEC11BP0C7V7 166 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 STAG3L2P0CL84 134 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 CT45A10P0DMU9 189 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 ARL6IP6Q8N6S5 226 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 C2CD4CQ8TF44 421 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 FAM19A4Q96LR4 140 aa12.34□□□□□ -0.43
ETFA-218ENST00000560899 PLECQ15149 4684 aaKnown RBP12.34□□□□□ -0.43
ETFA-218ENST00000560899 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
ETFA-218ENST00000560899 RBAKDNA6NC62 111 aa12.33□□□□□ -0.44
ETFA-218ENST00000560899 SLC25A5P05141 298 aaKnown RBP12.33□□□□□ -0.44
ETFA-218ENST00000560899 TPT1P13693 172 aaKnown RBP12.33□□□□□ -0.44
ETFA-218ENST00000560899 GFI1BQ5VTD9 330 aa12.33□□□□□ -0.44
ETFA-218ENST00000560899 STOML3Q8TAV4 291 aa12.33□□□□□ -0.44
ETFA-218ENST00000560899 LINC00476Q8WZB0 136 aa12.33□□□□□ -0.44
ETFA-218ENST00000560899 Q9H3A6 140 aa12.33□□□□□ -0.44
ETFA-218ENST00000560899 YTHDF2Q9Y5A9 579 aaKnown RBP12.33□□□□□ -0.44
ETFA-218ENST00000560899 ALMS1Q8TCU4 4167 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 KLLNB2CW77 178 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 UMAD1C9J7I0 102 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 PRB4P10163 310 aaPredicted RBP12.32□□□□□ -0.44
ETFA-218ENST00000560899 CRISP2P16562 243 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 CSN1S1P47710 185 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 CD300CQ08708 224 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 ZNF493Q6ZR52 646 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 AGPAT4-IT1Q9H0P7 198 aa12.32□□□□□ -0.44
ETFA-218ENST00000560899 CTXND1A0A1B0GTU2 59 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 LYRM9A8MSI8 78 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 ZNF705GA8MUZ8 300 aaPredicted RBP12.31□□□□□ -0.44
ETFA-218ENST00000560899 CXorf1O96002 111 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 ARL14EPLP0DKL9 152 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 EMP1P54849 157 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 RANP62826 216 aaKnown RBP12.31□□□□□ -0.44
ETFA-218ENST00000560899 TMEM78Q5T7P6 136 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
ETFA-218ENST00000560899 LINC01587Q99440 93 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
ETFA-218ENST00000560899 RYR2Q92736 4967 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 DNAH1Q9P2D7 4330 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 IGKV2-40A0A087WW87 121 aaPredicted RBP12.3□□□□□ -0.44
ETFA-218ENST00000560899 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
ETFA-218ENST00000560899 EIF3GO75821 320 aaKnown RBP eCLIP12.3□□□□□ -0.44
ETFA-218ENST00000560899 IGKV2D-40P01614 121 aaPredicted RBP12.3□□□□□ -0.44
ETFA-218ENST00000560899 KIR3DS1Q14943 382 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 EIF5AL1Q6IS14 154 aaKnown RBP12.3□□□□□ -0.44
ETFA-218ENST00000560899 SLC51BQ86UW2 128 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 RNASE8Q8TDE3 154 aaKnown RBP12.3□□□□□ -0.44
ETFA-218ENST00000560899 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 TMEM167BQ9NRX6 74 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
ETFA-218ENST00000560899 DEFB131BA0A096LNP1 70 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 C7orf71A4D174 169 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 GCHFRP30047 84 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 ERCC8Q13216 396 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 DPPA3Q6W0C5 159 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 ZNF492Q9P255 531 aa12.29□□□□□ -0.44
ETFA-218ENST00000560899 ZNF138P52744 262 aa12.28□□□□□ -0.44
ETFA-218ENST00000560899 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
ETFA-218ENST00000560899 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
ETFA-218ENST00000560899 ZFAND2AQ8N6M9 145 aa12.28□□□□□ -0.44
ETFA-218ENST00000560899 VGLL1Q99990 258 aa12.28□□□□□ -0.44
ETFA-218ENST00000560899 DIRC3C9JPN6 131 aa12.27□□□□□ -0.45
ETFA-218ENST00000560899 AZU1P20160 251 aa12.27□□□□□ -0.45
ETFA-218ENST00000560899 ZNF767PQ75MW2 155 aa12.27□□□□□ -0.45
ETFA-218ENST00000560899 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.45
ETFA-218ENST00000560899 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 IGLL5B9A064 214 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
ETFA-218ENST00000560899 PRM2P04554 102 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 RAB5CP51148 216 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 DAD1P61803 113 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 CMTM2Q8TAZ6 248 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 APLNQ9ULZ1 77 aa12.26□□□□□ -0.45
ETFA-218ENST00000560899 SERTM2A0A1B0GWG4 89 aa12.25□□□□□ -0.45
ETFA-218ENST00000560899 MAP1LC3B2A6NCE7 125 aa12.25□□□□□ -0.45
ETFA-218ENST00000560899 PGPA6NDG6 321 aa12.25□□□□□ -0.45
ETFA-218ENST00000560899 GPX1P07203 203 aa12.25□□□□□ -0.45
ETFA-218ENST00000560899 CCDC28AQ8IWP9 274 aa12.25□□□□□ -0.45
ETFA-218ENST00000560899 MAP1LC3BQ9GZQ8 125 aa12.25□□□□□ -0.45
ETFA-218ENST00000560899 J3KRW8 73 aa12.24□□□□□ -0.45
ETFA-218ENST00000560899 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms