RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MRPL32Q9BYC8 188 aaKnown RBP5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 DEFB126Q9BYW3 111 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 GFRA4Q9GZZ7 299 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 MDFICQ9P1T7 246 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 AMMECR1Q9Y4X0 333 aaPredicted RBP5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 NCKAP5O14513 1909 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 PATE3B3GLJ2 98 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 K7EMI3 77 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 FKBP2P26885 142 aaKnown RBP5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 ASIPP42127 132 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 C20orf173Q96LM9 149 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 ENY2Q9NPA8 101 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 COL27A1Q8IZC6 1860 aaPredicted RBP5.21□□□□□ -1.57
TSPAN3-209ENST00000560715 IGKV2D-26A0A0A0MRZ7 120 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 IGHV1-45A0A0A0MS14 117 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 SHISA9B4DS77 424 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 MOSP00540 346 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 IGHV4-30-4P0DP06 118 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 Q6YL49 198 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 RBMXL3Q8N7X1 1067 aaKnown RBP5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 RASL11BQ9BPW5 248 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 C17orf98A8MV24 154 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 PEX7O00628 323 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 ZNF883P0CG24 379 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 HLA-DRB4P13762 266 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 CA6P23280 308 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 CD164Q04900 197 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 POU2AF1Q16633 256 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 KRTAP27-1Q3LI81 207 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 TMEM158Q8WZ71 300 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 IMMP1LQ96LU5 166 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 SIGLEC9Q9Y336 463 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 HLA-DRB4X5D2U9 266 aa5.21□□□□□ -1.58
TSPAN3-209ENST00000560715 EML6Q6ZMW3 1958 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 CELA2AP08217 269 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 COX6A1P12074 109 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 LY6DQ14210 128 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 FAM27BQ5VT28 67 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 PPP1R27Q86WC6 154 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 MKXQ8IYA7 352 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 IFI27L1Q96BM0 104 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 NABP2Q9BQ15 211 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 ATP6V0E1O15342 81 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 CCL4P13236 92 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 DLX6P56179 175 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 LOXL1Q08397 574 aaPredicted RBP5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 MORN3Q6PF18 240 aaPredicted RBP5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 SBSPONQ8IVN8 264 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 OR10J6PQ8NGY7 276 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 LINC01587Q99440 93 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 TTTY13Q9BZ97 58 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 CHCHD2Q9Y6H1 151 aaPredicted RBP5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 SPEGQ15772 3267 aa5.2□□□□□ -1.58
TSPAN3-209ENST00000560715 ZNF318Q5VUA4 2279 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 A0A1W2PPI3 338 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 C8orf88P0DMB2 117 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 IFI27P40305 119 aaPredicted RBP5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 KIR2DS2P43631 304 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 ZNF329Q86UD4 541 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 ZNF492Q9P255 531 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 HHLA3Q9XRX5 114 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 RTTNQ86VV8 2226 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 WDFY3Q8IZQ1 3526 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 LOC100131303A0A0U1RQF7 123 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 C19orf71A6NCJ1 209 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 CRLF1O75462 422 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 P01737 135 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 HBDP02042 147 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 GLRXP35754 106 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 SPRNQ5BIV9 151 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 KLF17Q5JT82 389 aaPredicted RBP5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 TMEM105Q8N8V8 129 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 GATD1Q8NB37 220 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 FGF23Q9GZV9 251 aaPredicted RBP5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 MUC6Q6W4X9 2439 aa5.19□□□□□ -1.58
TSPAN3-209ENST00000560715 WI2-2373I1.2A0A1W2PRP0 233 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 LINC00694P0DN24 101 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 SSR4P51571 173 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 LINC00322Q6ZN03 302 aaPredicted RBP5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 KLF13Q9Y2Y9 288 aaPredicted RBP5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 LINC01548A6NM66 108 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 A8MWV9 139 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 IL4P05112 153 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 PSMB2P49721 201 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 UBE2L3P68036 154 aaKnown RBP5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 PAX8Q06710 450 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 CIARTQ8N365 385 aaPredicted RBP5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 UBALD1Q8TB05 177 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 DMDP11532 3685 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 TECTAO75443 2155 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 RPL7P18124 248 aaKnown RBP5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 ZNF497Q6ZNH5 498 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 RPS19BP1Q86WX3 136 aaKnown RBP5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 OR1L8Q8NGR8 309 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 FAM167A-AS1Q96KT0 104 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 HIST1H4GQ99525 98 aa5.18□□□□□ -1.58
TSPAN3-209ENST00000560715 TRBV7-3A0A075B6L6 115 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 TRGV8A0A0C4DH27 118 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms