RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 C10orf111Q8N326 155 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 FAM24BQ8N5W8 94 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TMEM229BQ8NBD8 167 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 GRPEL2Q8TAA5 225 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 BORCS8Q96FH0 119 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 OR4C12Q96R67 309 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 CCL19Q99731 98 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 NABP2Q9BQ15 211 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 FAM103A1Q9BTL3 118 aaKnown RBP0.05□□□□□ -2.4
SPG11-222ENST00000560435 EFCAB11Q9BUY7 163 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 PCBD2Q9H0N5 130 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 CENPHQ9H3R5 247 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 NIT2Q9NQR4 276 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 GID8Q9NWU2 228 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 PLAC8Q9NZF1 115 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 MED11Q9P086 117 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 ATPIF1Q9UII2 106 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 JPT1Q9UK76 154 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 BOKQ9UMX3 212 aaPredicted RBP0.05□□□□□ -2.4
SPG11-222ENST00000560435 LAMTOR2Q9Y2Q5 125 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TPRKBQ9Y3C4 175 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 SYNMO15061 1565 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 NAV3Q8IVL0 2385 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 ZCCHC11Q5TAX3 1644 aaKnown RBP0.05□□□□□ -2.4
SPG11-222ENST00000560435 TECPR2O15040 1411 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 FANCMQ8IYD8 2048 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 NAV2Q8IVL1 2488 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 H3BMG7 143 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 GABARAPH6UMI1 98 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 TRACP01848 142 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 GYPBP06028 91 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 SAA1P0DJI8 122 aaPredicted RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 FABP2P12104 132 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 TPT1P13693 172 aaKnown RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 FABP4P15090 132 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 S100A11P31949 105 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 S100A5P33763 92 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 SDC2P34741 201 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 POLR2HP52434 150 aaKnown RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 ZNF137PP52743 207 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 NDUFA6P56556 154 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 SPINK7P58062 85 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 RPS28P62857 69 aaKnown RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 TFAMQ00059 246 aaKnown RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 VMA21Q3ZAQ7 101 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 ASB16-AS1Q495Z4 193 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 XAF1Q6GPH4 301 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 TOMM20LQ6UXN7 152 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 Q6ZS92 163 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 C5orf17Q8NAS9 161 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 MORN4Q8NDC4 146 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 OR4B1Q8NGF8 309 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 THEM6Q8WUY1 208 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 NAT14Q8WUY8 206 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 DYDC1Q8WWB3 177 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 CIB3Q96Q77 187 aaPredicted RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 LIMD2Q9BT23 127 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 CCDC32Q9BV29 185 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 C19orf12Q9NSK7 152 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 MED31Q9Y3C7 131 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 MPC1Q9Y5U8 109 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 MYH3P11055 1940 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 OTOGQ6ZRI0 2925 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 PIK3C2AO00443 1686 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 ZGRF1Q86YA3 2104 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 N4BP2Q86UW6 1770 aaPredicted RBP0.04□□□□□ -2.4
SPG11-222ENST00000560435 FAM135BQ49AJ0 1406 aa0.04□□□□□ -2.4
SPG11-222ENST00000560435 TNCP24821 2201 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 NUP210LQ5VU65 1888 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 KCPQ6ZWJ8 1503 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 PTPRDP23468 1912 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 FAT4Q6V0I7 4981 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 CTTNBP2Q8WZ74 1663 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 A0A096LNT2 108 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 TRAV13-1A0A0B4J241 112 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 NBDYA0A0U1RRE5 68 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 C3orf85A0A1B0GTC6 90 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 A0A1W2PPB8 328 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 A0A1W2PRS3 328 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 NUPR2A6NF83 97 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 HIGD1CA8MV81 97 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 KIR3DP1A8MWS1 328 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 E7EQ34 232 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 PFDN1O60925 122 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 SULT1C4O75897 302 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 FAM107AO95990 144 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 IGF2P01344 180 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 MT-ND6P03923 174 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 SLC25A4P12235 298 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 RPL7P18124 248 aaKnown RBP0.03□□□□□ -2.4
SPG11-222ENST00000560435 CRYGSP22914 178 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 RPL22P35268 128 aaKnown RBP0.03□□□□□ -2.4
SPG11-222ENST00000560435 SPINT3P49223 89 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 SRP9P49458 86 aaKnown RBP0.03□□□□□ -2.4
SPG11-222ENST00000560435 CAV3P56539 151 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 FXYD6P3P58550 94 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 DNAJB13P59910 316 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 MAXP61244 160 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 RPL37AP61513 92 aaKnown RBP0.03□□□□□ -2.4
SPG11-222ENST00000560435 RPL37P61927 97 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms