RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
APH1B-207ENST00000559971 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
APH1B-207ENST00000559971 ATRXP46100 2492 aa12.57□□□□□ -0.4
APH1B-207ENST00000559971 COL6A6A6NMZ7 2263 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 D6R8Y8 96 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 G3V318 75 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 TRGV3P03979 118 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 CKS2P33552 79 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 MRPL51Q4U2R6 128 aaKnown RBP12.56□□□□□ -0.4
APH1B-207ENST00000559971 SAMD13Q5VXD3 122 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
APH1B-207ENST00000559971 TMSB15BA0A087X1C1 80 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 A0A0G2JLM5 398 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 IGHG2P01859 326 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 CSN3P07498 182 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 CACNG7P62955 275 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 ATOH7Q8N100 152 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 SPOCK3Q9BQ16 436 aa12.55□□□□□ -0.4
APH1B-207ENST00000559971 M0QZ24 198 aa12.54□□□□□ -0.4
APH1B-207ENST00000559971 ARL3P36405 182 aa12.54□□□□□ -0.4
APH1B-207ENST00000559971 SLC25A34Q6PIV7 304 aa12.54□□□□□ -0.4
APH1B-207ENST00000559971 C8orf86Q6ZUL3 223 aa12.54□□□□□ -0.4
APH1B-207ENST00000559971 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
APH1B-207ENST00000559971 MAP1LC3AQ9H492 121 aa12.54□□□□□ -0.4
APH1B-207ENST00000559971 NXT2Q9NPJ8 142 aaKnown RBP12.54□□□□□ -0.4
APH1B-207ENST00000559971 TMEM213A2RRL7 107 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 A6NDX4 124 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 OVOL1O14753 267 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 TCF21O43680 179 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
APH1B-207ENST00000559971 Q71RC1 249 aaPredicted RBP12.53□□□□□ -0.4
APH1B-207ENST00000559971 AMN1Q8IY45 258 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 Q8TAT8 98 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 PIFOQ8TCI5 191 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 GLMPQ8WWB7 406 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 SIGLEC8Q9NYZ4 499 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 IGHV4-61A0A0C4DH41 118 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 HBDP02042 147 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
APH1B-207ENST00000559971 ATP5J2P56134 94 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 BATFQ16520 125 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 LGALS9CQ6DKI2 356 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 C16orf92Q96LL3 132 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
APH1B-207ENST00000559971 TRAV40A0A0B4J280 105 aa12.52□□□□□ -0.41
APH1B-207ENST00000559971 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.41
APH1B-207ENST00000559971 B4DSR2 109 aa12.52□□□□□ -0.41
APH1B-207ENST00000559971 MSMBP08118 114 aa12.52□□□□□ -0.41
APH1B-207ENST00000559971 HLA-DMBP28068 263 aa12.52□□□□□ -0.41
APH1B-207ENST00000559971 IFI27P40305 119 aaPredicted RBP12.52□□□□□ -0.41
APH1B-207ENST00000559971 IGSF10Q6WRI0 2623 aa12.52□□□□□ -0.41
APH1B-207ENST00000559971 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 TRAV8-2A0A0B4J237 113 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 LINC01548A6NM66 108 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 DLEU1O43261 78 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 SLC25A16P16260 332 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 ERCC8Q13216 396 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 C12orf54Q6X4T0 127 aa12.51□□□□□ -0.41
APH1B-207ENST00000559971 IL17RELQ6ZVW7 336 aa12.5□□□□□ -0.41
APH1B-207ENST00000559971 TMEM219Q86XT9 240 aa12.5□□□□□ -0.41
APH1B-207ENST00000559971 DEFB125Q8N687 156 aa12.5□□□□□ -0.41
APH1B-207ENST00000559971 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
APH1B-207ENST00000559971 ORAOV1Q8WV07 137 aa12.5□□□□□ -0.41
APH1B-207ENST00000559971 TMEM89A2RUT3 159 aa12.49□□□□□ -0.41
APH1B-207ENST00000559971 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
APH1B-207ENST00000559971 PPIFP30405 207 aaKnown RBP12.49□□□□□ -0.41
APH1B-207ENST00000559971 IGFL4Q6B9Z1 124 aa12.49□□□□□ -0.41
APH1B-207ENST00000559971 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
APH1B-207ENST00000559971 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
APH1B-207ENST00000559971 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
APH1B-207ENST00000559971 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 IGHV3OR16-8A0A075B7F1 116 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 MED14OSP0DP75 135 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 RNF182Q8N6D2 247 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 GOLT1BQ9Y3E0 138 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 KALRNO60229 2985 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 ADGRG4Q8IZF6 3080 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 HIVEP3Q5T1R4 2406 aa12.48□□□□□ -0.41
APH1B-207ENST00000559971 J3QLI3 93 aa12.47□□□□□ -0.41
APH1B-207ENST00000559971 K7EMT4 169 aa12.47□□□□□ -0.41
APH1B-207ENST00000559971 SNAI2O43623 268 aa12.47□□□□□ -0.41
APH1B-207ENST00000559971 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
APH1B-207ENST00000559971 PSMG3-AS1Q96PY0 264 aa12.47□□□□□ -0.41
APH1B-207ENST00000559971 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
APH1B-207ENST00000559971 TRAV21A0A0B4J279 112 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 LOC389332A0A1B0GUA5 103 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 H3BUX3 64 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 COX8AP10176 69 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 BRD3OSQ6XYD6 125 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 ZNF738Q8NE65 137 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 IFI27L1Q96BM0 104 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 NBASA2RRP1 2371 aa12.46□□□□□ -0.41
APH1B-207ENST00000559971 KMT2BQ9UMN6 2715 aaPredicted RBP12.46□□□□□ -0.42
APH1B-207ENST00000559971 IGHV3-66A0A0C4DH42 116 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms