RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 LCN12Q6JVE5 192 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 EBLN2Q6P2I7 272 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 VKORC1L1Q8N0U8 176 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 ATOH7Q8N100 152 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 NHLRC2Q8NBF2 726 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 MAPK1IP1LQ8NDC0 245 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 OR4X2Q8NGF9 303 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 OR4C13Q8NGP0 309 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 OR9G4Q8NGQ1 327 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 OSR1Q8TAX0 266 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-216ENST00000559496 FLYWCH2Q96CP2 140 aaKnown RBP5.52□□□□□ -1.53
ZEB1-216ENST00000559496 RCHY1Q96PM5 261 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 VGLL1Q99990 258 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 C19orf24Q9BVV8 132 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 SPANXCQ9NY87 97 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 RABAC1Q9UI14 185 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 HILPDAQ9Y5L2 63 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 MINOS1-NBL1R4GNA1 71 aa5.52□□□□□ -1.53
ZEB1-216ENST00000559496 NAV2Q8IVL1 2488 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 FAM90A9PA6NNJ1 464 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 OOSP1A8MZH6 123 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 M0QXV9 152 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 M0R2Z0 102 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 TIMM23O14925 209 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 NPFFO15130 113 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 SSSCA1O60232 199 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 HSBP1O75506 76 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 OR5AL1P0C617 328 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 IER3P46695 156 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 RPS16P62249 146 aaKnown RBP5.51□□□□□ -1.53
ZEB1-216ENST00000559496 HBG1P69891 147 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 HBG2P69892 147 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 CX3CL1P78423 397 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 ZFAND6Q6FIF0 208 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 TMEM136Q6ZRR5 245 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 SLC25A33Q9BSK2 321 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 CSDC2Q9Y534 153 aaKnown RBP5.51□□□□□ -1.53
ZEB1-216ENST00000559496 ARL2-SNX15V9GYD0 113 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 POLQO75417 2590 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 ABCA12Q86UK0 2595 aa5.51□□□□□ -1.53
ZEB1-216ENST00000559496 FASNP49327 2511 aaKnown RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 FBN2P35556 2912 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 TENM4Q6N022 2769 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 CR1P17927 2039 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 IGHV3OR16-10A0A075B7F0 116 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 A0A087X0K7 114 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 TRAV40A0A0B4J280 105 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 IGHV1-69DA0A0B4J2H0 117 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 SRRM4A7MD48 611 aaKnown RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 FABP5P3A8MUU1 101 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 C9JCJ5 164 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 FAM90A26D6RGX4 464 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 CST7O76096 145 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 CA1P00915 261 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 IGHV1-69P01742 117 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 SAA1P0DJI8 122 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 IGHV4-31P0DP07 118 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 NTF3P20783 257 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 SAA4P35542 130 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 TCTAP57738 103 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 VMA21Q3ZAQ7 101 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 PSMG4Q5JS54 123 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 C2orf91Q6ZV80 131 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 WFDC11Q8NEX6 87 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 WIPF2Q8TF74 440 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 RITA1Q96K30 269 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 FOXC2Q99958 501 aa5.5□□□□□ -1.53
ZEB1-216ENST00000559496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.538e-10■■■■□ 20.2
ZEB1-216ENST00000559496 UTP20O75691 2785 aaKnown RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 PRRC2AP48634 2157 aaKnown RBP5.5□□□□□ -1.53
ZEB1-216ENST00000559496 TRAV3A0A0B4J244 114 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 C15orf61A6NNL5 157 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 KRTAP29-1A8MX34 341 aaPredicted RBP5.49□□□□□ -1.53
ZEB1-216ENST00000559496 C11orf94C9JXX5 98 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 F8WDY8 70 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 J3QLI3 93 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 BMPR1BO00238 502 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 UPK2O00526 184 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 SYNGR2O43760 224 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 CHST1O43916 411 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 IAPPP10997 89 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 NPPCP23582 126 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 SRIP30626 198 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 PAX9P55771 341 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 GNB1P62873 340 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 PDLIM3Q53GG5 364 aaPredicted RBP5.49□□□□□ -1.53
ZEB1-216ENST00000559496 TMEM78Q5T7P6 136 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 RUSC1-AS1Q66K80 236 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 Q6ZUT4 128 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 MMD2Q8IY49 270 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 DYNAPQ8N1N2 210 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 TEX29Q8N6K0 151 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 DNAJC30Q96LL9 226 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 TM2D2Q9BX73 214 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 PRSS22Q9GZN4 317 aa5.49□□□□□ -1.53
ZEB1-216ENST00000559496 VSIRQ9H7M9 311 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms