RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CDKN1BP46527 198 aa15.77■□□□□ 0.12
SNX1-206ENST00000559389 TMEM78Q5T7P6 136 aa15.77■□□□□ 0.12
SNX1-206ENST00000559389 GOLT1AQ6ZVE7 132 aa15.77■□□□□ 0.12
SNX1-206ENST00000559389 FAM19A4Q96LR4 140 aa15.77■□□□□ 0.12
SNX1-206ENST00000559389 IGF2BP2-AS1Q96M15 143 aa15.77■□□□□ 0.12
SNX1-206ENST00000559389 NKX6-2Q9C056 277 aaPredicted RBP15.77■□□□□ 0.12
SNX1-206ENST00000559389 SERTM2A0A1B0GWG4 89 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 TEX46H3BTG2 121 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 INSP01308 110 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 TCRAP04437 139 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 TSPOP30536 169 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 LEPP41159 167 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 PPT1P50897 306 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 Q8TAT8 98 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 ZNF492Q9P255 531 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 EPDR1Q9UM22 224 aa15.76■□□□□ 0.11
SNX1-206ENST00000559389 PAGE4O60829 102 aa15.75■□□□□ 0.11
SNX1-206ENST00000559389 ZNF138P52744 262 aa15.75■□□□□ 0.11
SNX1-206ENST00000559389 CCL20P78556 96 aa15.75■□□□□ 0.11
SNX1-206ENST00000559389 ZNF705AQ6ZN79 300 aaPredicted RBP15.75■□□□□ 0.11
SNX1-206ENST00000559389 ATG101Q9BSB4 218 aa15.75■□□□□ 0.11
SNX1-206ENST00000559389 TRAV12-2A0A075B6T6 113 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 CRISP2P16562 243 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 ATP5G3P48201 142 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 CCDC28AQ8IWP9 274 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 CYB561D1Q8N8Q1 229 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 OR11H2Q8NH07 326 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 MANBALQ9NQG1 85 aa15.74■□□□□ 0.11
SNX1-206ENST00000559389 TRBV7-9A0A0J9YWB2 115 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 IFNA7P01567 189 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 BLOC1S1P78537 153 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 CST9LP1Q5W188 147 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 TEX261Q6UWH6 196 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 C1orf158Q8N1D5 194 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 RARRES2Q99969 163 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 TCEAL7Q9BRU2 100 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 GNG13Q9P2W3 67 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 GOLT1BQ9Y3E0 138 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 X6R8D5 127 aa15.73■□□□□ 0.11
SNX1-206ENST00000559389 DNAH9Q9NYC9 4486 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 TRAV8-1A0A0A6YYK1 113 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 KLLNB2CW77 178 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 PEX7O00628 323 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 RBMY1A1P0DJD3 496 aaKnown RBP15.72■□□□□ 0.11
SNX1-206ENST00000559389 RBMY1CP0DJD4 496 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 KIR3DS1Q14943 382 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 RBMY1FQ15415 496 aaKnown RBP15.72■□□□□ 0.11
SNX1-206ENST00000559389 GFI1BQ5VTD9 330 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 ZFAND2AQ8N6M9 145 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 LENEPQ9Y5L5 61 aa15.72■□□□□ 0.11
SNX1-206ENST00000559389 K7EQM0 130 aa15.71■□□□□ 0.11
SNX1-206ENST00000559389 NMBP08949 121 aa15.71■□□□□ 0.11
SNX1-206ENST00000559389 TMEM75Q8N9X5 138 aa15.71■□□□□ 0.11
SNX1-206ENST00000559389 HIST1H2BAQ96A08 127 aa15.71■□□□□ 0.11
SNX1-206ENST00000559389 IGLV2-11P01706 119 aa15.7■□□□□ 0.1
SNX1-206ENST00000559389 PMS2P11Q13670 270 aa15.7■□□□□ 0.1
SNX1-206ENST00000559389 ZNF680Q8NEM1 530 aa15.7■□□□□ 0.1
SNX1-206ENST00000559389 LYPD6BQ8NI32 183 aa15.7■□□□□ 0.1
SNX1-206ENST00000559389 NEU1Q99519 415 aa15.7■□□□□ 0.1
SNX1-206ENST00000559389 C20orf144Q9BQM9 153 aa15.7■□□□□ 0.1
SNX1-206ENST00000559389 IGHV3OR16-12A0A075B7B8 117 aa15.69■□□□□ 0.1
SNX1-206ENST00000559389 J3KRW8 73 aa15.69■□□□□ 0.1
SNX1-206ENST00000559389 PRR9Q5T870 116 aa15.69■□□□□ 0.1
SNX1-206ENST00000559389 Q8NAQ8 132 aa15.69■□□□□ 0.1
SNX1-206ENST00000559389 TENM3Q9P273 2699 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 FBLL1A6NHQ2 334 aaKnown RBP15.68■□□□□ 0.1
SNX1-206ENST00000559389 C11orf94C9JXX5 98 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 IFNA1P01562 189 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 MIFP14174 115 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 BTN1A1Q13410 526 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 TMEM256Q8N2U0 113 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 SGK494Q96LW2 274 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 EDA2RQ9HAV5 297 aa15.68■□□□□ 0.1
SNX1-206ENST00000559389 C7orf71A4D174 169 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 F6UZH7 168 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 BCL2P10415 239 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 FLI1Q01543 452 aaPredicted RBP15.67■□□□□ 0.1
SNX1-206ENST00000559389 TVP23CQ96ET8 276 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 TMEM208Q9BTX3 173 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 C11orf68Q9H3H3 251 aaKnown RBP15.67■□□□□ 0.1
SNX1-206ENST00000559389 PSG8Q9UQ74 426 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 COL7A1Q02388 2944 aa15.67■□□□□ 0.1
SNX1-206ENST00000559389 IGHV4-28A0A0C4DH34 117 aa15.66■□□□□ 0.1
SNX1-206ENST00000559389 SCO2A0A1W2PP80 73 aa15.66■□□□□ 0.1
SNX1-206ENST00000559389 Q86TA4 180 aa15.66■□□□□ 0.1
SNX1-206ENST00000559389 LINC00479Q96M42 142 aa15.66■□□□□ 0.1
SNX1-206ENST00000559389 TXNDC17Q9BRA2 123 aa15.66■□□□□ 0.1
SNX1-206ENST00000559389 NDFIP1Q9BT67 221 aa15.66■□□□□ 0.1
SNX1-206ENST00000559389 HUWE1Q7Z6Z7 4374 aaKnown RBP15.66■□□□□ 0.1
SNX1-206ENST00000559389 TRAV12-3A0A0B4J271 114 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 TRAV34A0A0B4J273 112 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 A0A0J9YWU9 116 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 SMIM9A6NGZ8 99 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 GPX1P07203 203 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 AKR1C3P42330 323 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 C2CD4CQ8TF44 421 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 C11orf52Q96A22 123 aa15.65■□□□□ 0.1
SNX1-206ENST00000559389 H7BYZ3 331 aa15.64■□□□□ 0.09
SNX1-206ENST00000559389 TAGLN2P37802 199 aaKnown RBP15.64■□□□□ 0.09
SNX1-206ENST00000559389 MEF2BQ02080 365 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms