RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 ARL16Q0P5N6 197 aa11.06□□□□□ -0.64
CDC42BPB-205ENST00000559245 Q6ZNX1 250 aa11.06□□□□□ -0.64
CDC42BPB-205ENST00000559245 MGST2Q99735 147 aa11.06□□□□□ -0.64
CDC42BPB-205ENST00000559245 C7orf66A4D0T2 115 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 SPINK4O60575 86 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 PRAF2O60831 178 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 TSC22D2O75157 780 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 ICAM4Q14773 271 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 LINC00467Q9BRT7 94 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 FLVCR2Q9UPI3 526 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 KLF12Q9Y4X4 402 aa11.05□□□□□ -0.64
CDC42BPB-205ENST00000559245 TRAV5A0A0B4J249 113 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 IGHV3-53P01767 116 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 TAS2R30P59541 319 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 ERCC8Q13216 396 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 GUK1Q16774 197 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 ST6GAL2Q96JF0 529 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 GGACTQ9BVM4 153 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 RCL1Q9Y2P8 373 aaKnown RBP11.04□□□□□ -0.64
CDC42BPB-205ENST00000559245 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 KLLNB2CW77 178 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 INMT-MINDY4F8WBC2 141 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 TCL1AP56279 114 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 CD300CQ08708 224 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 BTN1A1Q13410 526 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 PRO0255Q9UI72 69 aa11.03□□□□□ -0.64
CDC42BPB-205ENST00000559245 M0R3E3 92 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 OR4E1P0C645 316 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 GCSHP23434 173 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 CAMLGP49069 296 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 CRYBA4P53673 196 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 SLAQ13239 276 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 MRPL23Q16540 153 aaKnown RBP11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 IAH1Q2TAA2 248 aaPredicted RBP11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 Q6ZRG5 221 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 FAM19A4Q96LR4 140 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 LINC00477Q96M19 166 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 LY96Q9Y6Y9 160 aa11.02□□□□□ -0.65
CDC42BPB-205ENST00000559245 TRAV6A0A075B6T7 132 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 ZNF253O75346 499 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 MPDU1O75352 247 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 MIC13Q5XKP0 118 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 OR1L4Q8NGR5 311 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 C8orf49Q96NF6 230 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 AGPAT4-IT1Q9H0P7 198 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 MRPL16Q9NX20 251 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 MSRB1Q9NZV6 116 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 GSKIPQ9P0R6 139 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 HHLA3Q9XRX5 114 aa11.01□□□□□ -0.65
CDC42BPB-205ENST00000559245 HAMPP81172 84 aa11□□□□□ -0.65
CDC42BPB-205ENST00000559245 RAB31Q13636 194 aa11□□□□□ -0.65
CDC42BPB-205ENST00000559245 FHL2Q14192 279 aa11□□□□□ -0.65
CDC42BPB-205ENST00000559245 NEGR1Q7Z3B1 354 aa11□□□□□ -0.65
CDC42BPB-205ENST00000559245 VGLL1Q99990 258 aa11□□□□□ -0.65
CDC42BPB-205ENST00000559245 TP53TG3Q9ULZ0 132 aa11□□□□□ -0.65
CDC42BPB-205ENST00000559245 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 K7EP13 123 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 RGS13O14921 159 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 MBPP02686 304 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 GPX1P07203 203 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 Q6ZSN1 163 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 WFDC10BQ8IUB3 73 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 MITD1Q8WV92 249 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 PFDN5Q99471 154 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 PRELID1Q9Y255 219 aa10.99□□□□□ -0.65
CDC42BPB-205ENST00000559245 CRISP2P16562 243 aa10.98□□□□□ -0.65
CDC42BPB-205ENST00000559245 EVI2AP22794 236 aa10.98□□□□□ -0.65
CDC42BPB-205ENST00000559245 CHAC2Q8WUX2 184 aa10.98□□□□□ -0.65
CDC42BPB-205ENST00000559245 IGHV1OR15-1A0A075B7D0 117 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 E5RGE8 158 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 L7N2F9 121 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 NDUFB4O95168 129 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 VAMP2P63027 116 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 PRR9Q5T870 116 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 Q6ZQT7 251 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 C9orf47Q6ZRZ4 202 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 C12orf45Q8N5I9 185 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 ZFAND2AQ8N6M9 145 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 ARPC5LQ9BPX5 153 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 SEC22CQ9BRL7 303 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 ALG5Q9Y673 324 aa10.97□□□□□ -0.65
CDC42BPB-205ENST00000559245 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 K7EQD1 137 aa10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 NMBP08949 121 aa10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 HIST1H1EP10412 219 aaKnown RBP10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 SRIP30626 198 aa10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 BCAP31P51572 246 aa10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 PDE6HQ13956 83 aa10.96□□□□□ -0.65
CDC42BPB-205ENST00000559245 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms