RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MSRB1Q9NZV6 116 aa12.85□□□□□ -0.35
SPG11-215ENST00000559193 ERCC8Q13216 396 aa12.84□□□□□ -0.35
SPG11-215ENST00000559193 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
SPG11-215ENST00000559193 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
SPG11-215ENST00000559193 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
SPG11-215ENST00000559193 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
SPG11-215ENST00000559193 ORM1P02763 201 aa12.83□□□□□ -0.35
SPG11-215ENST00000559193 SIRPDQ9H106 197 aa12.83□□□□□ -0.35
SPG11-215ENST00000559193 ZFAND3Q9H8U3 227 aa12.83□□□□□ -0.35
SPG11-215ENST00000559193 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
SPG11-215ENST00000559193 OR1N2Q8NGR9 330 aa12.83□□□□□ -0.36
SPG11-215ENST00000559193 FAM110DQ8TAY7 271 aaPredicted RBP12.83□□□□□ -0.36
SPG11-215ENST00000559193 IFI27L1Q96BM0 104 aa12.83□□□□□ -0.36
SPG11-215ENST00000559193 CNFNQ9BYD5 112 aa12.83□□□□□ -0.36
SPG11-215ENST00000559193 GAS8-AS1O95177 125 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 AMMECR1LQ6DCA0 310 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 TMEM97Q5BJF2 176 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 SPTA1P02549 2419 aa12.82□□□□□ -0.36
SPG11-215ENST00000559193 PTPRZ1P23471 2315 aaPredicted RBP12.82□□□□□ -0.36
SPG11-215ENST00000559193 FABP5P3A8MUU1 101 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 TCTAP57738 103 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 BOD1L2Q8IYS8 172 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 TRAV8-6A0A0B4J262 113 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 BUB3O43684 328 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 NDUFS7O75251 213 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 AJUBAQ96IF1 538 aa12.81□□□□□ -0.36
SPG11-215ENST00000559193 ATP6V0E1O15342 81 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 DTX2Q86UW9 622 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 WFDC3Q8IUB2 231 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 A0A1W2PPR1 153 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 CLPSL1A2RUU4 121 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 CLEC3BP05452 202 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 S100A7P31151 101 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 SEC11AP67812 179 aa12.8□□□□□ -0.36
SPG11-215ENST00000559193 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 C7orf71A4D174 169 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 KLK9Q2XQG4 91 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 MAP1LC3AQ9H492 121 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 KLK9Q9UKQ9 250 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
SPG11-215ENST00000559193 SMAD7O15105 426 aaKnown RBP12.79□□□□□ -0.36
SPG11-215ENST00000559193 PPIFP30405 207 aaKnown RBP12.78□□□□□ -0.36
SPG11-215ENST00000559193 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
SPG11-215ENST00000559193 PEF1Q9UBV8 284 aaKnown RBP12.78□□□□□ -0.36
SPG11-215ENST00000559193 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
SPG11-215ENST00000559193 PPBPP02775 128 aa12.78□□□□□ -0.36
SPG11-215ENST00000559193 UQCRFS1P47985 274 aa12.77□□□□□ -0.36
SPG11-215ENST00000559193 RAB9AP51151 201 aa12.77□□□□□ -0.36
SPG11-215ENST00000559193 KLRB1Q12918 225 aa12.77□□□□□ -0.36
SPG11-215ENST00000559193 C18orf15Q96N68 181 aa12.77□□□□□ -0.36
SPG11-215ENST00000559193 C11orf21Q9P2W6 132 aa12.77□□□□□ -0.36
SPG11-215ENST00000559193 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 G3V318 75 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 TNFRSF6BO95407 300 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 EVI2AP22794 236 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 CDKN1BP46527 198 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 CLEC19AQ6UXS0 136 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 SLC50A1Q9BRV3 221 aa12.77□□□□□ -0.37
SPG11-215ENST00000559193 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 GOSR1O95249 250 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
SPG11-215ENST00000559193 UBE2E1P51965 193 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 A1L4Q6 167 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 SAA4P35542 130 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 LEPP41159 167 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 PCP2Q8IVA1 136 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 OR9G4Q8NGQ1 327 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
SPG11-215ENST00000559193 NBASA2RRP1 2371 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 FCER1GP30273 86 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 NMUP48645 174 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 NXT2Q9NPJ8 142 aaKnown RBP12.75□□□□□ -0.37
SPG11-215ENST00000559193 WNK2Q9Y3S1 2297 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 IGHV3-49A0A0A0MS15 119 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 SIVA1O15304 175 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 HSD52Q0P140 79 aa12.75□□□□□ -0.37
SPG11-215ENST00000559193 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
SPG11-215ENST00000559193 TRGV3P03979 118 aa12.74□□□□□ -0.37
SPG11-215ENST00000559193 RAXQ9Y2V3 346 aa12.74□□□□□ -0.37
SPG11-215ENST00000559193 ODF1Q14990 250 aa12.74□□□□□ -0.37
SPG11-215ENST00000559193 JMJD8Q96S16 334 aa12.73□□□□□ -0.37
SPG11-215ENST00000559193 H3BRM9 83 aa12.73□□□□□ -0.37
SPG11-215ENST00000559193 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
SPG11-215ENST00000559193 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
SPG11-215ENST00000559193 EEF1AKMT3Q96AZ1 226 aa12.73□□□□□ -0.37
SPG11-215ENST00000559193 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 IGHV7-4-1A0A0J9YVY3 117 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms