RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MEOX2P50222 304 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 HIST2H2BDQ6DRA6 164 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 GBGT1Q8N5D6 347 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 Q8TAT8 98 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 GTSF1Q8WW33 167 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 DAZ1Q9NQZ3 744 aaKnown RBP9.83□□□□□ -0.84
SMAD3-207ENST00000558763 RNF114Q9Y508 228 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 SPINK4O60575 86 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 P01737 135 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 LGALS1P09382 135 aaKnown RBP9.82□□□□□ -0.84
SMAD3-207ENST00000558763 NDUFA6P56556 154 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 GFI1BQ5VTD9 330 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 UBE2E2Q96LR5 201 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 PRR25Q96S07 402 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 GPR61Q9BZJ8 451 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 TRAPPC1Q9Y5R8 145 aa9.82□□□□□ -0.84
SMAD3-207ENST00000558763 TMEM213A2RRL7 107 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 HIGD1CA8MV81 97 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 K7EMT4 169 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 TCTEX1D4Q5JR98 221 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 COA6Q5JTJ3 125 aaKnown RBP9.81□□□□□ -0.84
SMAD3-207ENST00000558763 TMEM136Q6ZRR5 245 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 C11orf44Q8N8P7 122 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
SMAD3-207ENST00000558763 C20orf173Q96LM9 149 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 RBAKDNA6NC62 111 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 FBLL1A6NHQ2 334 aaKnown RBP9.81□□□□□ -0.84
SMAD3-207ENST00000558763 MRPL54Q6P161 138 aaKnown RBP9.81□□□□□ -0.84
SMAD3-207ENST00000558763 C18orf65Q6ZTR6 163 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 TCF24Q7RTU0 167 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-207ENST00000558763 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 GNB1LQ9BYB4 327 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 SMPXQ9UHP9 88 aa9.81□□□□□ -0.84
SMAD3-207ENST00000558763 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 A0A087WW49 117 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 A0A1B0GXF2 115 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 RPL19P84098 196 aaKnown RBP9.8□□□□□ -0.84
SMAD3-207ENST00000558763 ERCC8Q13216 396 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 KRTAP24-1Q3LI83 254 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 KHDC1LQ5JSQ8 128 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 GDF5OSQ5U4N7 250 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 ZNF575Q86XF7 245 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 HIST3H2BBQ8N257 126 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 OR4B1Q8NGF8 309 aa9.8□□□□□ -0.84
SMAD3-207ENST00000558763 A0A1W2PS18 150 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 A8MWP6 167 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 SNURFLB1AK76 121 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 CDX1P47902 265 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-207ENST00000558763 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-207ENST00000558763 PROK1P58294 105 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 FAM106AQ4KMX7 169 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 GFRA4Q9GZZ7 299 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 A8MWL6 223 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 GZMBP10144 247 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 REC114Q7Z4M0 266 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 AGPAT4-IT1Q9H0P7 198 aa9.79□□□□□ -0.84
SMAD3-207ENST00000558763 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
SMAD3-207ENST00000558763 FAM231BA6NCW3 169 aa9.78□□□□□ -0.84
SMAD3-207ENST00000558763 CD28P10747 220 aa9.78□□□□□ -0.84
SMAD3-207ENST00000558763 AKR1D1P51857 326 aa9.78□□□□□ -0.84
SMAD3-207ENST00000558763 FOXA3P55318 350 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-207ENST00000558763 SAPCD1Q5SSQ6 148 aa9.78□□□□□ -0.84
SMAD3-207ENST00000558763 OR2D3Q8NGH3 330 aa9.78□□□□□ -0.84
SMAD3-207ENST00000558763 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
SMAD3-207ENST00000558763 NRN1Q9NPD7 142 aa9.78□□□□□ -0.84
SMAD3-207ENST00000558763 SH2D1AO60880 128 aa9.77□□□□□ -0.84
SMAD3-207ENST00000558763 HOXD3P31249 432 aaPredicted RBP9.77□□□□□ -0.84
SMAD3-207ENST00000558763 RASL11AQ6T310 242 aa9.77□□□□□ -0.84
SMAD3-207ENST00000558763 C9orf47Q6ZRZ4 202 aa9.77□□□□□ -0.84
SMAD3-207ENST00000558763 C16orf92Q96LL3 132 aa9.77□□□□□ -0.84
SMAD3-207ENST00000558763 SELENOKQ9Y6D0 94 aa9.77□□□□□ -0.84
SMAD3-207ENST00000558763 A0A1B0GUS0 222 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 XKRY2A2RUG3 117 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 LGALS9O00182 355 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 MT-ND6P03923 174 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 WDR73Q6P4I2 378 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 LINC00518Q8N0U6 118 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 PPP1R14DQ9NXH3 145 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 CLEC5AQ9NY25 188 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 TP53TG3Q9ULZ0 132 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 UFC1Q9Y3C8 167 aa9.77□□□□□ -0.85
SMAD3-207ENST00000558763 SYNJ2BPP57105 145 aa9.76□□□□□ -0.85
SMAD3-207ENST00000558763 SLAQ13239 276 aa9.76□□□□□ -0.85
SMAD3-207ENST00000558763 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
SMAD3-207ENST00000558763 COX19Q49B96 90 aa9.76□□□□□ -0.85
SMAD3-207ENST00000558763 FAM162BQ5T6X4 162 aa9.76□□□□□ -0.85
SMAD3-207ENST00000558763 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
SMAD3-207ENST00000558763 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
SMAD3-207ENST00000558763 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-207ENST00000558763 HLA-DQA1P01909 254 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 CT45A10P0DMU9 189 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 LINC00310P59036 64 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 DEFB1P60022 68 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 KRTAP10-3P60369 221 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms