RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 IGKV1D-17A0A075B6S4 117 aa11.23□□□□□ -0.61
SPG11-210ENST00000558319 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
SPG11-210ENST00000558319 DOCK7Q96N67 2140 aa11.23□□□□□ -0.61
SPG11-210ENST00000558319 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
SPG11-210ENST00000558319 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
SPG11-210ENST00000558319 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
SPG11-210ENST00000558319 FAM120AOSQ5T036 256 aa11.23□□□□□ -0.61
SPG11-210ENST00000558319 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
SPG11-210ENST00000558319 Q9HAA7 133 aa11.23□□□□□ -0.61
SPG11-210ENST00000558319 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 Q8N8P6 123 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 TMEM258P61165 79 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 SH2D6Q7Z4S9 175 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 DKK2Q9UBU2 259 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 ZNF561-AS1K7EIQ3 104 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 CSRP1P21291 193 aaKnown RBP11.22□□□□□ -0.61
SPG11-210ENST00000558319 NTN3O00634 580 aaPredicted RBP11.22□□□□□ -0.61
SPG11-210ENST00000558319 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 K7EMI3 77 aa11.22□□□□□ -0.61
SPG11-210ENST00000558319 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.61
SPG11-210ENST00000558319 IGKV1-39P01597 117 aa11.21□□□□□ -0.61
SPG11-210ENST00000558319 IGKV1D-39P04432 117 aa11.21□□□□□ -0.61
SPG11-210ENST00000558319 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
SPG11-210ENST00000558319 SIGLEC8Q9NYZ4 499 aa11.21□□□□□ -0.61
SPG11-210ENST00000558319 MRPS18CQ9Y3D5 142 aaKnown RBP11.21□□□□□ -0.61
SPG11-210ENST00000558319 Q6P435 159 aa11.21□□□□□ -0.62
SPG11-210ENST00000558319 ESM1Q9NQ30 184 aa11.21□□□□□ -0.62
SPG11-210ENST00000558319 QRFPP83859 136 aa11.21□□□□□ -0.62
SPG11-210ENST00000558319 C12orf74Q32Q52 190 aa11.21□□□□□ -0.62
SPG11-210ENST00000558319 PNRC2Q9NPJ4 139 aaKnown RBP11.21□□□□□ -0.62
SPG11-210ENST00000558319 PRSS46E5RG02 174 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 LOC285556D6RIA3 1793 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 GREB1LQ9C091 1923 aaPredicted RBP11.2□□□□□ -0.62
SPG11-210ENST00000558319 SRRM5B3KS81 715 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 TMEM75Q8N9X5 138 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 PTPRDP23468 1912 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 SHISA9B4DS77 424 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 NBL1P41271 181 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 CT83Q5H943 113 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 DTX1Q86Y01 620 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 TMEM141Q96I45 108 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 NDUFA12Q9UI09 145 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 ARFGEF3Q5TH69 2177 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 I3L3M4 83 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 Q6ZQT7 251 aa11.2□□□□□ -0.62
SPG11-210ENST00000558319 MRPL23Q16540 153 aaKnown RBP11.19□□□□□ -0.62
SPG11-210ENST00000558319 V9GYV3 84 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 CEP250Q9BV73 2442 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 NKAPP1Q8N9T2 125 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 LCTP09848 1927 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 IGLV3-19P01714 112 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 CDKN1BP46527 198 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 SHANK2-AS3Q9BTD1 123 aa11.19□□□□□ -0.62
SPG11-210ENST00000558319 DSCR9P59020 149 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 NRGNQ92686 78 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 ZC2HC1AQ96GY0 325 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 IGKV1OR2-108A0A075B7D4 117 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 CRYGCP07315 174 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 LGALS9BQ3B8N2 356 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 TEX36Q5VZQ5 186 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 LGALS9CQ6DKI2 356 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 SMIM27A0A1W2PRY6 76 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 NPYP01303 97 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 CADP27708 2225 aa11.18□□□□□ -0.62
SPG11-210ENST00000558319 ARTNQ5T4W7 220 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 LINC01619G3V211 115 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 DIAPH2-AS1Q14236 149 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 MSMBP08118 114 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
SPG11-210ENST00000558319 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 NDUFB8O95169 186 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 TAL2Q16559 108 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 NDUFS7O75251 213 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
SPG11-210ENST00000558319 DOCK8Q8NF50 2099 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 RNF114Q9Y508 228 aa11.16□□□□□ -0.62
SPG11-210ENST00000558319 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 IGKV3D-7A0A0C4DH55 119 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 KLF5Q13887 457 aaPredicted RBP11.15□□□□□ -0.62
SPG11-210ENST00000558319 TMEM243Q9BU79 118 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 FAM186AA6NE01 2351 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms