RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 FYCO1Q9BQS8 1478 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 SHROOM3Q8TF72 1996 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 PATJQ8NI35 1801 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 SCN3AQ9NY46 2000 aa1.61□□□□□ -2.15
SPG11-206ENST00000558093 PLXNA2O75051 1894 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 ARHGEF28Q8N1W1 1705 aaKnown RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 IQGAP3Q86VI3 1631 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 IGHV3OR15-7A0A075B7D8 119 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 A0A0D9SG52 128 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 G3V3Q6 166 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 K7EP34 96 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 NDUFB6O95139 128 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 NDUFB2O95178 105 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 IGLV3-25P01717 112 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 CRYGAP11844 174 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 FABP4P15090 132 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 SNCAP37840 140 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 YPEL3P61236 119 aaPredicted RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 FOXF1Q12946 379 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 LUZP6Q538Z0 58 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 RNASE13Q5GAN3 156 aaKnown RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 FAM104BQ5XKR9 115 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 OR2T2Q6IF00 324 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 SOSTDC1Q6X4U4 206 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 LINC00299Q6ZSB3 139 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 ADM2Q7Z4H4 148 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 LINC00301Q8NCQ3 95 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 C10orf105Q8TEF2 133 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 ITLN2Q8WWU7 325 aaPredicted RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 COPS9Q8WXC6 57 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 RAB37Q96AX2 223 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 HYLS1Q96M11 299 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 AQP10Q96PS8 301 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 YPEL2Q96QA6 119 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 DSCR8Q96T75 97 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 PKMYT1Q99640 499 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 B9D2Q9BPU9 175 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 BCL2L10Q9HD36 194 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 FAM60AQ9NP50 221 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 RPL26L1Q9UNX3 145 aaKnown RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 TPRKBQ9Y3C4 175 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 PHLDA3Q9Y5J5 127 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 SERP1Q9Y6X1 66 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 COL1A1P02452 1464 aaPredicted RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 NYNRINQ9P2P1 1898 aaKnown RBP1.6□□□□□ -2.15
SPG11-206ENST00000558093 MAGI3Q5TCQ9 1506 aa1.6□□□□□ -2.15
SPG11-206ENST00000558093 ADGRB1O14514 1584 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 MED1Q15648 1581 aaPredicted RBP1.59□□□□□ -2.15
SPG11-206ENST00000558093 DIP2BQ9P265 1576 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 MYO9BQ13459 2157 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 MROH1Q8NDA8 1641 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 RTEL1-TNFRSF6BF6WH68 1400 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CRB1P82279 1406 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 TRGV5A0A0B4J1U4 118 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 LOC107986453A0A1B0GWG9 222 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 IGLC7A0M8Q6 106 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 RBAKDNA6NC62 111 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 M0R2P5 195 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 BPY2O14599 106 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 SNCGO76070 127 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CYB5AP00167 134 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 HLA-DQA1P01909 254 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 RBP4P02753 201 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CGB3P0DN86 165 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CGB7P0DN87 165 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CD28P10747 220 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 SLC25A4P12235 298 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 SLC25A6P12236 298 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 FUSP35637 526 aaKnown RBP eCLIP1.59□□□□□ -2.15
SPG11-206ENST00000558093 PCBD1P61457 104 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 BLCAPP62952 87 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 RPL18Q07020 188 aaKnown RBP1.59□□□□□ -2.15
SPG11-206ENST00000558093 Q0VG73 95 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CDK5R1Q15078 307 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 SS18Q15532 418 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 TMEM155Q4W5P6 130 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 ZNF678Q5SXM1 525 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 LINC01545Q5VT33 79 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 Q6ZS92 163 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 TMEM256Q8N2U0 113 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 C10orf111Q8N326 155 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 APCDD1LQ8NCL9 501 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 CLDND2Q8NHS1 167 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 TSLPQ969D9 159 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BLQ99880 126 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 SLC35B3Q9H1N7 401 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 UQCR10Q9UDW1 63 aa1.59□□□□□ -2.15
SPG11-206ENST00000558093 THADAQ6YHU6 1953 aa1.59□□□□□ -2.16
SPG11-206ENST00000558093 CASP8AP2Q9UKL3 1982 aa1.59□□□□□ -2.16
SPG11-206ENST00000558093 COL18A1P39060 1754 aa1.59□□□□□ -2.16
SPG11-206ENST00000558093 COL5A1P20908 1838 aaPredicted RBP1.59□□□□□ -2.16
SPG11-206ENST00000558093 TANC1Q9C0D5 1861 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 LCTP09848 1927 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 SEC16AO15027 2179 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 MYO5CQ9NQX4 1742 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 MARF1Q9Y4F3 1742 aaKnown RBP1.58□□□□□ -2.16
SPG11-206ENST00000558093 EML5Q05BV3 1969 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 LMTK2Q8IWU2 1503 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 IGHV3-49A0A0A0MS15 119 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms