RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 AGPAT4-IT1Q9H0P7 198 aa8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 NXT2Q9NPJ8 142 aaKnown RBP8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 UBE2L3P68036 154 aaKnown RBP8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 WDR87Q6ZQQ6 2873 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 LRP4O75096 1905 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 SPTY2D1-AS1A0A0U1RR47 76 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 A0A1W2PQD3 144 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 NCBP2LA6PVI3 153 aaKnown RBP8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 C5orf67F2Z3F1 127 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 COX6A1P12074 109 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 IGLV3-21P80748 117 aaPredicted RBP8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 DPH3P1Q9H4G8 78 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 A0A1W2PPC4 97 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 PRSS1P07477 247 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 CFC1BP0CG36 223 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 CFC1P0CG37 223 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 LINC01561Q8N1V8 128 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 RTL8AQ9BWD3 113 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 C16orf95Q9H693 158 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 LAMA2P24043 3122 aaKnown RBP8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 PATE4P0C8F1 98 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 TIRAPP58753 221 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 DEFB121Q5J5C9 76 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 FAM90A1Q86YD7 464 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 COL4A6Q14031 1691 aa8.62□□□□□ -1.03
SEMA4B-204ENST00000558065 TTC28Q96AY4 2481 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 IGKV1OR2-108A0A075B7D4 117 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 ELANEP08246 267 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 PCBD1P61457 104 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 TP53TG1Q9Y2A0 90 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 ZNF256Q9Y2P7 627 aaPredicted RBP8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 DNAJC13O75165 2243 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 PYYP10082 97 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 Q71RC1 249 aaPredicted RBP8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 IGHV3-9P01782 118 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
SEMA4B-204ENST00000558065 RIGQ13278 110 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 DOCK7Q96N67 2140 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 IGHV5-51A0A0C4DH38 117 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 SPINK2P20155 84 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 C5orf38Q86SI9 138 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 ZNF785A8K8V0 405 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 FKBP2P26885 142 aaKnown RBP8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 ERVK-16P61578 105 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 TDHQ8IZJ6 230 aa8.6□□□□□ -1.03
SEMA4B-204ENST00000558065 TRBV10-2A0A0K0K1G8 114 aa8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 LINC00205P59089 165 aa8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 FGF23Q9GZV9 251 aaPredicted RBP8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 CRYGSP22914 178 aa8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 PRDX2P32119 198 aa8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 DUTP33316 252 aaKnown RBP8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 RAI1Q7Z5J4 1906 aaPredicted RBP8.59□□□□□ -1.03
SEMA4B-204ENST00000558065 IGHV3-64DA0A0J9YX35 117 aa8.59□□□□□ -1.04
SEMA4B-204ENST00000558065 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.04
SEMA4B-204ENST00000558065 ZNF134P52741 427 aa8.59□□□□□ -1.04
SEMA4B-204ENST00000558065 HERVK_113P61574 105 aa8.59□□□□□ -1.04
SEMA4B-204ENST00000558065 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 ZNF32P17041 273 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 NSUN5P1Q3KNT7 163 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 HES3Q5TGS1 186 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 Q8N8P6 123 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 Q9UFV3 132 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 SCRG1O75711 98 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 LEPP41159 167 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 MRPL51Q4U2R6 128 aaKnown RBP8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 FAM104BQ5XKR9 115 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 WDR31Q8NA23 367 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 A0A0U1RQV1 116 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 LINC00271P0C7V0 271 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 METTL26Q96S19 204 aa8.58□□□□□ -1.04
SEMA4B-204ENST00000558065 APC2O95996 2303 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 IGHV3-13P01766 116 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 P0DMU3 169 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 FSCN3Q9NQT6 498 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 NOTCH4Q99466 2003 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 CACNA1HO95180 2353 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 FER1L5A0AVI2 2057 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 LINC00473A8K010 186 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 SMKR1H3BMG3 65 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 NXPH1P58417 271 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 FXYD5Q96DB9 178 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 FAM53AQ6NSI3 398 aaPredicted RBP8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
SEMA4B-204ENST00000558065 SSR4P51571 173 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms