RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MANBALQ9NQG1 85 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 ARL2-SNX15V9GYD0 113 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 NMBP08949 121 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 PPT1P50897 306 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
NEDD1-213ENST00000557644 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 HUWE1Q7Z6Z7 4374 aaKnown RBP11.16□□□□□ -0.62
NEDD1-213ENST00000557644 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 TMEM78Q5T7P6 136 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
NEDD1-213ENST00000557644 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 J3KRW8 73 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 ARL6IP6Q8N6S5 226 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 RARRES2Q99969 163 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 ATG101Q9BSB4 218 aa11.16□□□□□ -0.62
NEDD1-213ENST00000557644 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
NEDD1-213ENST00000557644 PEX7O00628 323 aa11.15□□□□□ -0.62
NEDD1-213ENST00000557644 BCL2P10415 239 aa11.15□□□□□ -0.62
NEDD1-213ENST00000557644 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
NEDD1-213ENST00000557644 PMS2P11Q13670 270 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 CYB561D1Q8N8Q1 229 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 TGP01266 2768 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 ZNF138P52744 262 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 CSNK1G2-AS1Q8NCQ2 148 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 TM2D3Q9BRN9 247 aa11.14□□□□□ -0.63
NEDD1-213ENST00000557644 UBE2CO00762 179 aa11.13□□□□□ -0.63
NEDD1-213ENST00000557644 IFNA1P01562 189 aa11.13□□□□□ -0.63
NEDD1-213ENST00000557644 CDKN1BP46527 198 aa11.13□□□□□ -0.63
NEDD1-213ENST00000557644 Q6ZWC4 215 aa11.13□□□□□ -0.63
NEDD1-213ENST00000557644 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
NEDD1-213ENST00000557644 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
NEDD1-213ENST00000557644 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
NEDD1-213ENST00000557644 LOC102723971A0A1B0GUV8 181 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 SERTM2A0A1B0GWG4 89 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 VAX2Q9UIW0 290 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 K7EQM0 130 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 RBMY1A1P0DJD3 496 aaKnown RBP11.12□□□□□ -0.63
NEDD1-213ENST00000557644 RBMY1CP0DJD4 496 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
NEDD1-213ENST00000557644 PRR9Q5T870 116 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 ZNF767PQ75MW2 155 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 TMEM75Q8N9X5 138 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 RCHY1Q96PM5 261 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 ODF3Q96PU9 254 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
NEDD1-213ENST00000557644 RBFOX3A6NFN3 312 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 TOR2AQ5JU69 321 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 GFI1BQ5VTD9 330 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 RNF183Q96D59 192 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 TCEAL7Q9BRU2 100 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 F6UZH7 168 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 LEPP41159 167 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 FLI1Q01543 452 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-213ENST00000557644 Q6ZQT7 251 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 C2CD4CQ8TF44 421 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 IGF2BP2-AS1Q96M15 143 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 SPATA25Q9BR10 227 aa11.11□□□□□ -0.63
NEDD1-213ENST00000557644 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 SPRY2O43597 315 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 CRISP2P16562 243 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 TSPOP30536 169 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 BTN1A1Q13410 526 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 FAM210AQ96ND0 272 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 KLLNB2CW77 178 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 AKR1C3P42330 323 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 RAB14P61106 215 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 TXNDC17Q9BRA2 123 aa11.1□□□□□ -0.63
NEDD1-213ENST00000557644 EIF5A2Q9GZV4 153 aaKnown RBP11.1□□□□□ -0.63
NEDD1-213ENST00000557644 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 INSP01308 110 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 PRM2P04554 102 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 GPX1P07203 203 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
NEDD1-213ENST00000557644 ZNF506Q5JVG8 444 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 C8orf49Q96NF6 230 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 TREM1Q9NP99 234 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 AMBPP02760 352 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 Q86TA4 180 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
NEDD1-213ENST00000557644 PDE6DO43924 150 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 TAGLN2P37802 199 aaKnown RBP11.08□□□□□ -0.64
NEDD1-213ENST00000557644 UBE2G1P62253 170 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 TP53TG1Q9Y2A0 90 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms