RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 OR2A1Q8NGT9 310 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 OR4K13Q8NH42 304 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 MFSD8Q8NHS3 518 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 FAM57AQ8TBR7 257 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 GABARAPL3Q9BY60 117 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 PLEKHF2Q9H8W4 249 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 DSPPQ9NZW4 1301 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 TIAM2Q8IVF5 1701 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV1-58A0A0C4DH39 117 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 KNCNA6PVL3 124 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 LYRM9A8MSI8 78 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 H3BT86 120 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 FXYD1O00168 92 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 HCRTO43612 131 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF324O75467 553 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 PTHP01270 115 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 INSP01308 110 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 SRP19P09132 144 aaKnown RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 CISD3P0C7P0 127 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 RBMXP38159 391 aaKnown RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF80P51504 273 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 SUB1P53999 127 aaKnown RBP eCLIP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 HERVK_113P61574 105 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 FBXL19-AS1Q494R0 122 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 Q56UQ5 140 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 Q5W150 140 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF571Q7Z3V5 609 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 FAM19A3Q7Z5A8 133 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 OR51H1Q8NH63 302 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 OR9G1Q8NH87 305 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF286AQ9HBT8 521 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 SERP1Q9Y6X1 66 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 BCORQ6W2J9 1755 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 HEATR5AQ86XA9 2040 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 MICAL3Q7RTP6 2002 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 SCN2AQ99250 2005 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 LRP4O75096 1905 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1-9A0A0C4DH69 117 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 A0A0J9YW62 118 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 UMAD1C9J7I0 102 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 M0R1X1 148 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 LST1O00453 97 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CPSF4O95639 269 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV3-7P01780 117 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TCRAP04437 139 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 EFNA4P52798 201 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 FKBP1AP62942 108 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 HBG1P69891 147 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 HBG2P69892 147 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CST6Q15828 149 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 PMCHL1Q16048 86 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 RTL8BQ17RB0 113 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 HES3Q5TGS1 186 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 MARCH3Q86UD3 253 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 C3orf56Q8N813 242 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 OR10G2Q8NGC3 310 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 S100A16Q96FQ6 103 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF414Q96IQ9 312 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 GINS4Q9BRT9 223 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TMEM70Q9BUB7 260 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 NAA60Q9H7X0 242 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 LAMTOR3Q9UHA4 124 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ANAPC10Q9UM13 185 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 SPCS1Q9Y6A9 102 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 PLXNB3Q9ULL4 1909 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 EML5Q05BV3 1969 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV6D-41A0A0C4DH26 115 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 GRIFINA4D1Z8 144 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 A8MWL6 223 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 C17orf112F2Z3M2 114 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 INS-IGF2F8WCM5 200 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 PLXNA2O75051 1894 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TRBV12-3P01733 135 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF688P0C7X2 276 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 RBM11P57052 281 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 DAD1P61803 113 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 MPV17LQ2QL34 196 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ETDBQ3ZM63 59 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 UBE2NLQ5JXB2 153 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CLLU1OSQ5K130 101 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 C1orf140Q5VVS0 124 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CEMP1Q6PRD7 247 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TIFABQ6ZNK6 161 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 C16orf47Q6ZP98 133 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TMEM75Q8N9X5 138 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 GEMIN6Q8WXD5 167 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TVP23CQ96ET8 276 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 DSCR8Q96T75 97 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TCEAL2Q9H3H9 227 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 SLC25A15Q9Y619 301 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 F11RQ9Y624 299 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 DLG5Q8TDM6 1919 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 COL4A1P02462 1669 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 MYO16Q9Y6X6 1858 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ANAPC1Q9H1A4 1944 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV1-50A0A075B6I6 118 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 SMIM26A0A096LP01 95 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV13-1A0A0B4J241 112 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV41A0A0B4J266 112 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 SSSCA1O60232 199 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms