RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 NPIPB6E9PJ23 425 aa9.44□□□□□ -0.9
SHMT2-233ENST00000557529 EDN2P20800 178 aa9.44□□□□□ -0.9
SHMT2-233ENST00000557529 ZNF138P52744 262 aa9.44□□□□□ -0.9
SHMT2-233ENST00000557529 COX19Q49B96 90 aa9.44□□□□□ -0.9
SHMT2-233ENST00000557529 LINC00322Q6ZN03 302 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-233ENST00000557529 C9orf47Q6ZRZ4 202 aa9.44□□□□□ -0.9
SHMT2-233ENST00000557529 OR9G4Q8NGQ1 327 aa9.44□□□□□ -0.9
SHMT2-233ENST00000557529 ANK3Q12955 4377 aaKnown RBP9.44□□□□□ -0.9
SHMT2-233ENST00000557529 FAM231BA6NCW3 169 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 IZUMO1RA6ND01 250 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 HAX1O00165 279 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 ERCC8Q13216 396 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 Q8TAT8 98 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 NAT8BQ9UHF3 227 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
SHMT2-233ENST00000557529 IGKV3-7A0A075B6H7 116 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 CA1P00915 261 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-233ENST00000557529 TRGC2P03986 189 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-233ENST00000557529 TCL1AP56279 114 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 PROK1P58294 105 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 PAFAH1B2P68402 229 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 FHL3Q13643 280 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 ZFP82Q8N141 532 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 RAX2Q96IS3 184 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-233ENST00000557529 MS4A6AQ9H2W1 248 aa9.42□□□□□ -0.9
SHMT2-233ENST00000557529 A0A1B0GUS0 222 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 CCL24O00175 119 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 CRIP1P50238 77 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
SHMT2-233ENST00000557529 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-233ENST00000557529 DUX3Q96PT4 197 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 NEU1Q99519 415 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 ASCL2Q99929 193 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
SHMT2-233ENST00000557529 TRAV2A0A0B4J234 112 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 XKRY2A2RUG3 117 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 HIGD1CA8MV81 97 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 K7EQG2 157 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 SH2D1AO60880 128 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 S100A6P06703 90 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
SHMT2-233ENST00000557529 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 RASL11AQ6T310 242 aa9.4□□□□□ -0.9
SHMT2-233ENST00000557529 SAV1Q9H4B6 383 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-233ENST00000557529 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 LOC105371267A0A1B0GV96 52 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 MT-ND6P03923 174 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 CSN3P07498 182 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 SRSF2Q01130 221 aaKnown RBP9.39□□□□□ -0.91
SHMT2-233ENST00000557529 ADAMTSL5Q6ZMM2 481 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
SHMT2-233ENST00000557529 ATP5L2Q7Z4Y8 100 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 WFDC3Q8IUB2 231 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 NUP35Q8NFH5 326 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 TRAPPC1Q9Y5R8 145 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 ZFHX3Q15911 3703 aa9.39□□□□□ -0.91
SHMT2-233ENST00000557529 FLNBO75369 2602 aaKnown RBP9.39□□□□□ -0.91
SHMT2-233ENST00000557529 HIVEP1P15822 2718 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 PHOX2AO14813 284 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 TFPI2P48307 235 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-233ENST00000557529 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-233ENST00000557529 Q6AWC8 147 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 FRZBQ92765 325 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 GNB1LQ9BYB4 327 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
SHMT2-233ENST00000557529 TRGC1P0CF51 173 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-233ENST00000557529 MRPL54Q6P161 138 aaKnown RBP9.37□□□□□ -0.91
SHMT2-233ENST00000557529 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 SIGLEC8Q9NYZ4 499 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-233ENST00000557529 TRAV25A0A0B4J276 109 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 SNURFLB1AK76 121 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 SPINK4O60575 86 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 HIST1H2BKO60814 126 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 HLA-DQA1P01909 254 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 HIST1H2BJP06899 126 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 ZNF688P0C7X2 276 aa9.37□□□□□ -0.91
SHMT2-233ENST00000557529 ZNF705DP0CH99 300 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-233ENST00000557529 ZNF705BP0CI00 300 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 938.8 ms