RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TTC32Q5I0X7 151 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 AGPAT4-IT1Q9H0P7 198 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 GPN1Q9HCN4 374 aaPredicted RBP11.01□□□□□ -0.65
TUBB3-213ENST00000557262 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 KLLNB2CW77 178 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 PYYP10082 97 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 ZNF680Q8NEM1 530 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 BLNKQ8WV28 456 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 C18orf15Q96N68 181 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 KRTAP4-5Q9BYR2 181 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 Q9H3A6 140 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 AAMDCQ9H7C9 122 aa11□□□□□ -0.65
TUBB3-213ENST00000557262 TRGV2A0A075B6R0 118 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 CDK2AP2O75956 126 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 GPX1P07203 203 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 RNASE4P34096 147 aaKnown RBP10.99□□□□□ -0.65
TUBB3-213ENST00000557262 NHLH2Q02577 135 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 CD300CQ08708 224 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 MZT2BQ6NZ67 158 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 C9orf47Q6ZRZ4 202 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 EXOC3-AS1Q8N2X6 119 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
TUBB3-213ENST00000557262 C11orf72Q8NBR9 251 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 NPCDR1Q9BY65 106 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 MRPS16Q9Y3D3 137 aaKnown RBP10.99□□□□□ -0.65
TUBB3-213ENST00000557262 LRP1BQ9NZR2 4599 aa10.99□□□□□ -0.65
TUBB3-213ENST00000557262 A0A1W2PPQ1 181 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 NMBP08949 121 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 CRISP2P16562 243 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 ICAM4Q14773 271 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 GCSAMLQ5JQS6 135 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 VSIG2Q96IQ7 327 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 SLC25A2Q9BXI2 301 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
TUBB3-213ENST00000557262 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 NBEAP1P0C6P0 100 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 BTF3P20290 206 aaKnown RBP10.97□□□□□ -0.65
TUBB3-213ENST00000557262 BTN1A1Q13410 526 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 FAM167A-AS1Q96KT0 104 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 SLC25A31Q9H0C2 315 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 FUT9Q9Y231 359 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 KLF12Q9Y4X4 402 aa10.97□□□□□ -0.65
TUBB3-213ENST00000557262 A0A096LPF7 62 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 SPINK4O60575 86 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 TMEM78Q5T7P6 136 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 LINC00299Q6ZSB3 139 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 MIR17HGQ75NE6 70 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 OR5C1Q8NGR4 320 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 THAP6Q8TBB0 222 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 VGLL1Q99990 258 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 ZNF492Q9P255 531 aa10.96□□□□□ -0.65
TUBB3-213ENST00000557262 E5RGE8 158 aa10.95□□□□□ -0.66
TUBB3-213ENST00000557262 RGS13O14921 159 aa10.95□□□□□ -0.66
TUBB3-213ENST00000557262 TCL1AP56279 114 aa10.95□□□□□ -0.66
TUBB3-213ENST00000557262 ASAH1Q13510 395 aa10.95□□□□□ -0.66
TUBB3-213ENST00000557262 IBA57Q5T440 356 aaKnown RBP10.95□□□□□ -0.66
TUBB3-213ENST00000557262 FAM122CQ6P4D5 195 aa10.95□□□□□ -0.66
TUBB3-213ENST00000557262 ZFAND2AQ8N6M9 145 aa10.95□□□□□ -0.66
TUBB3-213ENST00000557262 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
TUBB3-213ENST00000557262 SIX6O95475 246 aa10.94□□□□□ -0.66
TUBB3-213ENST00000557262 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
TUBB3-213ENST00000557262 S100ZQ8WXG8 99 aa10.94□□□□□ -0.66
TUBB3-213ENST00000557262 NMES1Q9C002 83 aa10.94□□□□□ -0.66
TUBB3-213ENST00000557262 TP53TG3Q9ULZ0 132 aa10.94□□□□□ -0.66
TUBB3-213ENST00000557262 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 PAX4O43316 350 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 CYCSP99999 105 aaKnown RBP10.93□□□□□ -0.66
TUBB3-213ENST00000557262 MAPKAPK5-AS1Q8N8E1 139 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 ST6GAL2Q96JF0 529 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 PAXXQ9BUH6 204 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 MRPL32Q9BYC8 188 aaKnown RBP10.93□□□□□ -0.66
TUBB3-213ENST00000557262 WDR61Q9GZS3 305 aaKnown RBP10.93□□□□□ -0.66
TUBB3-213ENST00000557262 KCNIP2Q9NS61 270 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 OR5AC2Q9NZP5 309 aa10.93□□□□□ -0.66
TUBB3-213ENST00000557262 TRBV7-9A0A0J9YWB2 115 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 H0YIZ8 118 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 OR10J4P0C629 311 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 ZNF138P52744 262 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 SLAQ13239 276 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 LRRC37A5PQ49AS3 106 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 PRR9Q5T870 116 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 Q6ZQT7 251 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 ICOSQ9Y6W8 199 aa10.92□□□□□ -0.66
TUBB3-213ENST00000557262 C17orf112F2Z3M2 114 aa10.91□□□□□ -0.66
TUBB3-213ENST00000557262 SIVA1O15304 175 aa10.91□□□□□ -0.66
TUBB3-213ENST00000557262 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
TUBB3-213ENST00000557262 CSN1S1P47710 185 aa10.91□□□□□ -0.66
TUBB3-213ENST00000557262 LYPD1Q8N2G4 141 aa10.91□□□□□ -0.66
TUBB3-213ENST00000557262 ENKURQ8TC29 256 aa10.91□□□□□ -0.66
TUBB3-213ENST00000557262 MRPL16Q9NX20 251 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms