RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 HRH1P35367 487 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 INPP1P49441 399 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 LYZP61626 148 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 FGL1Q08830 312 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 KLF9Q13886 244 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-245ENST00000556958 PRR4Q16378 134 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 PHLDA2Q53GA4 152 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 OR52I2Q8NH67 350 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 LRRC20Q8TCA0 184 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 DYNC2LI1Q8TCX1 351 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 C15orf40Q8WUR7 153 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 ZC2HC1AQ96GY0 325 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 ACY3Q96HD9 319 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 SH3BGRL3Q9H299 93 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 TMEM56-RWDD3S4R434 201 aa3.64□□□□□ -1.83
ATXN3-245ENST00000556958 TRAV26-2A0A0B4J265 109 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 LINC00854A0A1B0GVQ3 168 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 FAM231BA6NCW3 169 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 ZFP92A6NM28 416 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 GPR31O00270 319 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 ATG12O94817 140 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 RAB3DO95716 219 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 CFDP00746 253 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-245ENST00000556958 RCVRNP35243 200 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 BSXQ3C1V8 233 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 C2orf83Q53S99 150 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 RNASE10Q5GAN6 216 aaKnown RBP3.63□□□□□ -1.83
ATXN3-245ENST00000556958 GFI1BQ5VTD9 330 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 LPCAT3Q6P1A2 487 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 DHRS11Q6UWP2 260 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 CCDC190Q86UF4 302 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 RNF182Q8N6D2 247 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 GPX8Q8TED1 209 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 RNF185Q96GF1 192 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 MIXL1Q9H2W2 232 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 SLC25A22Q9H936 323 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 MCUBQ9NWR8 336 aa3.63□□□□□ -1.83
ATXN3-245ENST00000556958 PAIP2BQ9ULR5 123 aaKnown RBP3.63□□□□□ -1.83
ATXN3-245ENST00000556958 TRAV8-2A0A0B4J237 113 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 TEX13DA0A0J9YY54 714 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-245ENST00000556958 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 CRYM-AS1A6NIL9 109 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 DISC1C4P0D8 188 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 GABARAPH6UMI1 98 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 CD3DP04234 171 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 TCL1AP56279 114 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 TAS2R19P59542 299 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 RGS21Q2M5E4 152 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 FAAP20Q6NZ36 180 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 DPPA3Q6W0C5 159 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 TBC1D26Q86UD7 250 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 FAM219AQ8IW50 185 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 TMEM229BQ8NBD8 167 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 RNASE11Q8TAA1 199 aaKnown RBP3.62□□□□□ -1.83
ATXN3-245ENST00000556958 ZFAND1Q8TCF1 268 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 MARCH1Q8TCQ1 289 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 IL22RA2Q969J5 263 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 MRGPRFQ96AM1 343 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 RPUSD4Q96CM3 377 aaKnown RBP3.62□□□□□ -1.83
ATXN3-245ENST00000556958 C2orf50Q96LR7 162 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 CCDC59Q9P031 241 aaKnown RBP3.62□□□□□ -1.83
ATXN3-245ENST00000556958 COPZ2Q9P299 210 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 MTFP1Q9UDX5 166 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 C14orf166Q9Y224 244 aaKnown RBP3.62□□□□□ -1.83
ATXN3-245ENST00000556958 KLF12Q9Y4X4 402 aa3.62□□□□□ -1.83
ATXN3-245ENST00000556958 IGKV2D-24A0A075B6R9 120 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 TRAV12-3A0A0B4J271 114 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 H7C1H1 209 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 CCSO14618 274 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 PHOX2AO14813 284 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 AKAIN1P0CW23 69 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 AKR1C4P17516 323 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 CXCL3P19876 107 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 LEPP41159 167 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-245ENST00000556958 SPCS3P61009 180 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 MEF2DQ14814 521 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 TRIM16LQ309B1 348 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 SP6Q3SY56 376 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 SPANXN2Q5MJ10 180 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 IBA57Q5T440 356 aaKnown RBP3.61□□□□□ -1.83
ATXN3-245ENST00000556958 GGNBP1Q5YKI7 109 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 EIF4E3Q8N5X7 224 aaKnown RBP3.61□□□□□ -1.83
ATXN3-245ENST00000556958 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 C11orf72Q8NBR9 251 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 OR4D10Q8NGI6 311 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 TERB2Q8NHR7 220 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 SLIRPQ9GZT3 109 aaKnown RBP3.61□□□□□ -1.83
ATXN3-245ENST00000556958 RABL2AQ9UBK7 228 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-245ENST00000556958 PSORS1C2Q9UIG4 136 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 RABL2BQ9UNT1 228 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
ATXN3-245ENST00000556958 IGKV1OR2-108A0A075B7D4 117 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 C3orf85A0A1B0GTC6 90 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 J3KRW8 73 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms