RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MARC2Q969Z3 335 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 LINC00479Q96M42 142 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 LINC00052Q96N35 136 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 FAM210AQ96ND0 272 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 B9D2Q9BPU9 175 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 WFDC10AQ9H1F0 79 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 ZNF331Q9NQX6 463 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-244ENST00000556898 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
ATXN3-244ENST00000556898 TRGV11A0A075B6L2 103 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 IGKV2-40A0A087WW87 121 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-244ENST00000556898 TRAV34A0A0B4J273 112 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 A0A1W2PRE2 83 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 KNCNA6PVL3 124 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 C11orf94C9JXX5 98 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 DNASE2O00115 360 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-244ENST00000556898 TSPAN4O14817 238 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 IGKV2D-40P01614 121 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-244ENST00000556898 SLC25A5P05141 298 aaKnown RBP3.93□□□□□ -1.78
ATXN3-244ENST00000556898 CD7P09564 240 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 CEBPGP53567 150 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 DEFB131AP59861 70 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 KRTAP10-11P60412 298 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 ERCC8Q13216 396 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 PSG3Q16557 428 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 ODF3L2Q3SX64 289 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 PSMG4Q5JS54 123 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 C9orf66Q5T8R8 295 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 GDF5OSQ5U4N7 250 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 APRG1Q8IVJ8 170 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 CCDC28AQ8IWP9 274 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 GPR82Q96P67 336 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 DERL1Q9BUN8 251 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 EIF5A2Q9GZV4 153 aaKnown RBP3.93□□□□□ -1.78
ATXN3-244ENST00000556898 TREM1Q9NP99 234 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 NRN1Q9NPD7 142 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 OTORQ9NRC9 128 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 SIGLEC8Q9NYZ4 499 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 ZNF256Q9Y2P7 627 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-244ENST00000556898 U3KQK5 164 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 DNAH3Q8TD57 4116 aa3.93□□□□□ -1.78
ATXN3-244ENST00000556898 NOTCH3Q9UM47 2321 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 TRAV8-1A0A0A6YYK1 113 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 RAB19A4D1S5 217 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 IFNA1P01562 189 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 IGKV3-20P01619 116 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 TCRAP04437 139 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 CD5P06127 495 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 ADCYAP1P18509 176 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 S100A7P31151 101 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 BMI1P35226 326 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 PPT1P50897 306 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 PSG9Q00887 426 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 LCN12Q6JVE5 192 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 GOLT1AQ6ZVE7 132 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 S100A7AQ86SG5 101 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 CYB561D1Q8N8Q1 229 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 Q8TAT8 98 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 RPUSD4Q96CM3 377 aaKnown RBP3.92□□□□□ -1.78
ATXN3-244ENST00000556898 PRR25Q96S07 402 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 VGLL1Q99990 258 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 SLC50A1Q9BRV3 221 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 MAP6D1Q9H9H5 199 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 MANBALQ9NQG1 85 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 MED9Q9NWA0 146 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 VAX2Q9UIW0 290 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 EPDR1Q9UM22 224 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 TENM3Q9P273 2699 aa3.92□□□□□ -1.78
ATXN3-244ENST00000556898 TRAV25A0A0B4J276 109 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 RBMY1BA6NDE4 496 aaKnown RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 RBMY1EA6NEQ0 496 aaKnown RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 PEX7O00628 323 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 ISLRO14498 428 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 ZNF253O75346 499 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 RBMY1DP0C7P1 496 aaKnown RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 FXYD7P58549 80 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 PAFAH1B2P68402 229 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 MEF2BQ02080 365 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 HIST1H1AQ02539 215 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 FOXI1Q12951 378 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 PMS2P11Q13670 270 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 PDE6HQ13956 83 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 PEA15Q15121 130 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 ZNF674Q2M3X9 581 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 Q6ZQT7 251 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 DEFB125Q8N687 156 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 NHLRC2Q8NBF2 726 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 ZNF738Q8NE65 137 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 CMTM2Q8TAZ6 248 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 TVP23CQ96ET8 276 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 SPAG8Q99932 426 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 GPR61Q9BZJ8 451 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 AGPAT4-IT1Q9H0P7 198 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 AAMDCQ9H7C9 122 aa3.91□□□□□ -1.78
ATXN3-244ENST00000556898 ZMAT5Q9UDW3 170 aaKnown RBP3.91□□□□□ -1.78
ATXN3-244ENST00000556898 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.78
ATXN3-244ENST00000556898 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.78
ATXN3-244ENST00000556898 OR4C46A6NHA9 309 aa3.9□□□□□ -1.79
ATXN3-244ENST00000556898 F6UZH7 168 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms