RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CNPY1Q3B7I2 92 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 LRTM2Q8N967 370 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 SDHCQ99643 169 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-219ENST00000556432 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
ACTN1-219ENST00000556432 PSENENQ9NZ42 101 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 MGAT4CQ9UBM8 478 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 ERCC8Q13216 396 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 BAK1Q16611 211 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 SPANXN2Q5MJ10 180 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
ACTN1-219ENST00000556432 PXDC1Q5TGL8 231 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 ZNF546Q86UE3 836 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 TP53TG3Q9ULZ0 132 aa9.31□□□□□ -0.92
ACTN1-219ENST00000556432 H3BQ15 152 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 SSSCA1O60232 199 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 ORM1P02763 201 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 GPX1P07203 203 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 OR4E1P0C645 316 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 SFTA3P0C7M3 94 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 OPCMLQ14982 345 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 TMEM128Q5BJH2 165 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 NPVFQ9HCQ7 196 aa9.3□□□□□ -0.92
ACTN1-219ENST00000556432 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
ACTN1-219ENST00000556432 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 KLLNB2CW77 178 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 AGPAT2O15120 278 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 CCNKO75909 580 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 METTL15P1P0C7V9 234 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 IGLC2P0DOY2 106 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 PPT1P50897 306 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 POLR2GP62487 172 aaKnown RBP eCLIP9.29□□□□□ -0.92
ACTN1-219ENST00000556432 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 TOMM5Q8N4H5 51 aa9.29□□□□□ -0.92
ACTN1-219ENST00000556432 SAT2Q96F10 170 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-219ENST00000556432 C9JCJ5 164 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 K7EPK0 472 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 GUK1Q16774 197 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 TRIQKQ629K1 86 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 Q6ZSA8 131 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 NHLRC2Q8NBF2 726 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 OR10P1Q8NGE3 313 aa9.28□□□□□ -0.92
ACTN1-219ENST00000556432 IGHV1OR15-1A0A075B7D0 117 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 IBA57-AS1B1ANH7 110 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 M0R3E3 92 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 BLNKQ8WV28 456 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 TMEM37Q8WXS4 190 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 ZNF479Q96JC4 524 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 SLC25A31Q9H0C2 315 aa9.27□□□□□ -0.93
ACTN1-219ENST00000556432 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-219ENST00000556432 LECT2O14960 151 aa9.26□□□□□ -0.93
ACTN1-219ENST00000556432 SFT2D2O95562 160 aa9.26□□□□□ -0.93
ACTN1-219ENST00000556432 IL7P13232 177 aa9.26□□□□□ -0.93
ACTN1-219ENST00000556432 FAUP35544 74 aaKnown RBP9.26□□□□□ -0.93
ACTN1-219ENST00000556432 AP3S2P59780 193 aa9.26□□□□□ -0.93
ACTN1-219ENST00000556432 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
ACTN1-219ENST00000556432 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
ACTN1-219ENST00000556432 LINC00477Q96M19 166 aa9.26□□□□□ -0.93
ACTN1-219ENST00000556432 TRAV8-6A0A0B4J262 113 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 FNDC10F2Z333 226 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 IGHV3-30-3P0DP02 117 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 BTCP35070 178 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 PPP1R1AQ13522 171 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 LINC01620Q4KN68 170 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 OR10J3Q5JRS4 329 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 Q6ZQT7 251 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 TM2D2Q9BX73 214 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 AGPAT4-IT1Q9H0P7 198 aa9.25□□□□□ -0.93
ACTN1-219ENST00000556432 IGKV2-40A0A087WW87 121 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-219ENST00000556432 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 ZNF253O75346 499 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 SCGB1D2O95969 90 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 IGKV2D-40P01614 121 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-219ENST00000556432 INPP1P49441 399 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 ID3Q02535 119 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 WFDC2Q14508 124 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 TMEM78Q5T7P6 136 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 PRR9Q5T870 116 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 IQCF2Q8IXL9 164 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 OR10G4Q8NGN3 311 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 SMIM8Q96KF7 97 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 FAM19A4Q96LR4 140 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 MGST2Q99735 147 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 TIMM9Q9Y5J7 89 aa9.24□□□□□ -0.93
ACTN1-219ENST00000556432 RS1O15537 224 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
ACTN1-219ENST00000556432 CRISP2P16562 243 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 C4orf46Q504U0 113 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 MUC21Q5SSG8 566 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 TMEM14EPQ6UXP3 125 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 Q6ZRG5 221 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 ZFAND2AQ8N6M9 145 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 FLVCR2Q9UPI3 526 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms