RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ODF3Q96PU9 254 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 ARPC5LQ9BPX5 153 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 AGPAT4-IT1Q9H0P7 198 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 A0A1W2PPV4 95 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 SMIM9A6NGZ8 99 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 HMGB3O15347 200 aaKnown RBP6.94□□□□□ -1.3
SRP54-210ENST00000556380 CDC34P49427 236 aaPredicted RBP6.94□□□□□ -1.3
SRP54-210ENST00000556380 RANP62826 216 aaKnown RBP6.94□□□□□ -1.3
SRP54-210ENST00000556380 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
SRP54-210ENST00000556380 UBE2L3P68036 154 aaKnown RBP6.94□□□□□ -1.3
SRP54-210ENST00000556380 KIR3DS1Q14943 382 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 ZNF726P1Q15940 193 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 ZFAND6Q6FIF0 208 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 C9orf47Q6ZRZ4 202 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 SSX7Q7RTT5 188 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 FAM19A4Q96LR4 140 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 Q9H3A6 140 aa6.94□□□□□ -1.3
SRP54-210ENST00000556380 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 TRAV12-2A0A075B6T6 113 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 KANTRA0A1W2PQU2 76 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 BCL2L11O43521 198 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 C1QBP02746 253 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 ARL14EPLP0DKL9 152 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 CDKN1BP46527 198 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 ERCC8Q13216 396 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 LGALSLQ3ZCW2 172 aaPredicted RBP6.93□□□□□ -1.3
SRP54-210ENST00000556380 TMUB2Q71RG4 321 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 AKAP14Q86UN6 197 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 BAP18Q8IXM2 172 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 ARL6IP6Q8N6S5 226 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 HYLS1Q96M11 299 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 LINC00477Q96M19 166 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 VGLL1Q99990 258 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 ACTR3CQ9C0K3 210 aaPredicted RBP6.93□□□□□ -1.3
SRP54-210ENST00000556380 AAMDCQ9H7C9 122 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 GOLT1BQ9Y3E0 138 aa6.93□□□□□ -1.3
SRP54-210ENST00000556380 RYR3Q15413 4870 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 IGKV2-40A0A087WW87 121 aaPredicted RBP6.92□□□□□ -1.3
SRP54-210ENST00000556380 A0A1B0GVG6 124 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 INSP01308 110 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 IGKV2D-40P01614 121 aaPredicted RBP6.92□□□□□ -1.3
SRP54-210ENST00000556380 PRM2P04554 102 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 GCHFRP30047 84 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 NANOS2P60321 138 aaKnown RBP6.92□□□□□ -1.3
SRP54-210ENST00000556380 CD300CQ08708 224 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 OTORQ9NRC9 128 aa6.92□□□□□ -1.3
SRP54-210ENST00000556380 hCG_2014768A0A024R1R8 64 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 CTXND1A0A1B0GTU2 59 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 PGPA6NDG6 321 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 KLLNB2CW77 178 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 UMAD1C9J7I0 102 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 DIRC3C9JPN6 131 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 CXorf1O96002 111 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 SLC25A5P05141 298 aaKnown RBP6.91□□□□□ -1.3
SRP54-210ENST00000556380 SEC11BP0C7V7 166 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 CRISP2P16562 243 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 TSPOP30536 169 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 GFI1BQ5VTD9 330 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 ZFAND2AQ8N6M9 145 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 C11orf45Q8TAV5 145 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 ZNF492Q9P255 531 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 RYR2Q92736 4967 aa6.91□□□□□ -1.3
SRP54-210ENST00000556380 TRBV7-9A0A0J9YWB2 115 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 PLAC8L1A1L4L8 177 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 ZNF705GA8MUZ8 300 aaPredicted RBP6.9□□□□□ -1.3
SRP54-210ENST00000556380 PFDN1O60925 122 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 ZNF324O75467 553 aaPredicted RBP6.9□□□□□ -1.3
SRP54-210ENST00000556380 HBE1P02100 147 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 NMBP08949 121 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.3
SRP54-210ENST00000556380 AZU1P20160 251 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 LEPP41159 167 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 CSN1S1P47710 185 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 FHITP49789 147 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 RRN3P1Q2M238 152 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 C12orf74Q32Q52 190 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 FAM74A1Q5RGS3 127 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 AKR1C8PQ5T2L2 129 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 EIF5AL1Q6IS14 154 aaKnown RBP6.9□□□□□ -1.3
SRP54-210ENST00000556380 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.3
SRP54-210ENST00000556380 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 STOML3Q8TAV4 291 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 RXFP4Q8TDU9 374 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 ZNF471Q9BX82 626 aaPredicted RBP6.9□□□□□ -1.3
SRP54-210ENST00000556380 TMPRSS5Q9H3S3 457 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 TMEM167BQ9NRX6 74 aa6.9□□□□□ -1.3
SRP54-210ENST00000556380 LOC102723971A0A1B0GUV8 181 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 ZNF138P52744 262 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 TAS2R60P59551 318 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 PRR9Q5T870 116 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms