RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 B9D2Q9BPU9 175 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 IFI27L2Q9H2X8 130 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 PLEKHA3Q9HB20 300 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 MRPL27Q9P0M9 148 aaKnown RBP3.03□□□□□ -1.92
ATXN3-240ENST00000556339 U3KQK5 164 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 COL7A1Q02388 2944 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 A0A1W2PPI3 338 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 SMIM27A0A1W2PRY6 76 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 FAM231BA6NCW3 169 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 FCN1O00602 326 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 TCAPO15273 167 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 SCGB1D1O95968 90 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 IGHG2P01859 326 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 APOA2P02652 100 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 LINC00614P0C842 121 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 LINC00869P0C866 280 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 C8orf88P0DMB2 117 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 MC5RP33032 325 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 SSTR5P35346 364 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 ATP5G3P48201 142 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 CRIP2P52943 208 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-240ENST00000556339 DIAPH2-AS1Q14236 149 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 USF2Q15853 346 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-240ENST00000556339 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 UTF1Q5T230 341 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 MIC13Q5XKP0 118 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 OR4A47Q6IF82 309 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 SLC25A48Q6ZT89 311 aaKnown RBP3.02□□□□□ -1.93
ATXN3-240ENST00000556339 ATP5L2Q7Z4Y8 100 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 MMD2Q8IY49 270 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF439Q8NDP4 499 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 OR1N2Q8NGR9 330 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 NABP2Q9BQ15 211 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 DNAJC4Q9NNZ3 241 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 SCRT2Q9NQ03 307 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF586Q9NXT0 402 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 RNF24Q9Y225 148 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 PAM16Q9Y3D7 125 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 OR51B2Q9Y5P1 312 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 TENM3Q9P273 2699 aa3.02□□□□□ -1.93
ATXN3-240ENST00000556339 TRBV20OR9-2A0A075B6H5 130 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 IZUMO1RA6ND01 250 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF705FA8MVS1 300 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 CORTO00230 105 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF253O75346 499 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 OR2J3O76001 311 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 CA2P00918 260 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 GPX1P07203 203 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF705DP0CH99 300 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF705BP0CI00 300 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 HIST1H1EP10412 219 aaKnown RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 PMCHP20382 165 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 LGALS7P47929 136 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF137PP52743 207 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 UBE2G2P60604 165 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 EGFEM1PQ0D2K5 195 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 KLF5Q13887 457 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 EBI3Q14213 229 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 MMDQ15546 238 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 DEFB136Q30KP8 78 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 CT45A1Q5HYN5 189 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 PVRIGQ6DKI7 326 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF833PQ6ZTB9 187 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 S100A7AQ86SG5 101 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 BAGE2Q86Y30 109 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 PDPNQ86YL7 162 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 Q8N9W7 124 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 THAP8Q8NA92 274 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 OR11H1Q8NG94 326 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 OR1L6Q8NGR2 347 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 CT45A3Q8NHU0 189 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 TMEM167AQ8TBQ9 72 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 GRAMD2BQ96HH9 432 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 RNF5Q99942 180 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 SRSF8Q9BRL6 282 aaKnown RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 SAMD10Q9BYL1 202 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 GFRA4Q9GZZ7 299 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 SEPSECSQ9HD40 501 aaKnown RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF331Q9NQX6 463 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 NDUFA4L2Q9NRX3 87 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF355PQ9NSJ1 428 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 SLC35D1Q9NTN3 355 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 YTHDF2Q9Y5A9 579 aaKnown RBP3.01□□□□□ -1.93
ATXN3-240ENST00000556339 V9GYV3 84 aa3.01□□□□□ -1.93
ATXN3-240ENST00000556339 TRAV41A0A0B4J266 112 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 TRBV6-1A0A0K0K1D8 114 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 TEX50A0A1B0GTY4 177 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 A0A1B0GV90 55 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 A0A1B0GW15 77 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 SNURFLB1AK76 121 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 G3V318 75 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 K7EN84 100 aa3□□□□□ -1.93
ATXN3-240ENST00000556339 OVOL1O14753 267 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 239.2 ms