RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 NPCDR1Q9BY65 106 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 DNAJC4Q9NNZ3 241 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 PXMP4Q9Y6I8 212 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 TRBV19A0A075B6N1 114 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 PVALBP20472 110 aaPredicted RBP6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 H2BFSP57053 126 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 EIF5AP63241 154 aaKnown RBP6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 NHLH2Q02577 135 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 LINC00336Q6ZUF6 198 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 TMUB2Q71RG4 321 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 S100A7AQ86SG5 101 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 STX12Q86Y82 276 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 OR1L4Q8NGR5 311 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 THAP6Q8TBB0 222 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 TMEM263Q8WUH6 116 aaKnown RBP6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 FAM167A-AS1Q96KT0 104 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 SLC25A2Q9BXI2 301 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 NMES1Q9C002 83 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 TMEM14CQ9P0S9 112 aa6.51□□□□□ -1.37
VIPAS39-207ENST00000555854 KRBOX1C9JBD0 128 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 H7BYZ3 331 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 J3KRW8 73 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 ZNF253O75346 499 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 PET100P0DJ07 73 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 ERCC8Q13216 396 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 RNF212Q495C1 297 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 PRR9Q5T870 116 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 Q6ZRG5 221 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 MIR17HGQ75NE6 70 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 EIF4E3Q8N5X7 224 aaKnown RBP6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 C15orf53Q8NAA6 179 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 OR5C1Q8NGR4 320 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 MRPL53Q96EL3 112 aaKnown RBP6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 PFDN5Q99471 154 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 RNF24Q9Y225 148 aa6.5□□□□□ -1.37
VIPAS39-207ENST00000555854 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 PRSS29PA6NIE9 313 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 KLLNB2CW77 178 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 F5H768 121 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 G3V3Q6 166 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 SMLR1H3BR10 107 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 ATP5G1P05496 136 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 HTN1P15515 57 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 HOXA5P20719 270 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 ATP5G3P48201 142 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 HBG1P69891 147 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 HBG2P69892 147 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 BTN1A1Q13410 526 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 RAB31Q13636 194 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 CLINT1Q14677 625 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 GUK1Q16774 197 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 ATP6V1FQ16864 119 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 LRRC37A5PQ49AS3 106 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 EIF5AL1Q6IS14 154 aaKnown RBP6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 Q6ZQT7 251 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 CCDC28AQ8IWP9 274 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 EXOC3-AS1Q8N2X6 119 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 KCNRGQ8N5I3 272 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 C11orf72Q8NBR9 251 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 INO80EQ8NBZ0 244 aaPredicted RBP6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 OR10J6PQ8NGY7 276 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 ZNRF2Q8NHG8 242 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 PPP1R14DQ9NXH3 145 aa6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 TIMM8BQ9Y5J9 83 aaPredicted RBP6.49□□□□□ -1.37
VIPAS39-207ENST00000555854 IGKV2-40A0A087WW87 121 aaPredicted RBP6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 TRAV12-3A0A0B4J271 114 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 KANTRA0A1W2PQU2 76 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 CBY3A6NI87 242 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 TAAR5O14804 337 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 MPDU1O75352 247 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 MPC2O95563 127 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 IGKV2D-40P01614 121 aaPredicted RBP6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 HIST1H1EP10412 219 aaKnown RBP6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 PDE6HQ13956 83 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 ZNF493Q6ZR52 646 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 FXYD5Q96DB9 178 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 ZNF503Q96F45 646 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 TNFSF18Q9UNG2 199 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 LINC00588Q9Y4M8 146 aa6.48□□□□□ -1.37
VIPAS39-207ENST00000555854 FAT1Q14517 4588 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 FXYD6-FXYD2A0A087WZ82 144 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 E5RGE8 158 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 TEX46H3BTG2 121 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 ARPC5O15511 151 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 ZNF324O75467 553 aaPredicted RBP6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 EIF3GO75821 320 aaKnown RBP eCLIP6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 NUDT3O95989 172 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 RLN2P04090 185 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms